Maintenance Notice

Due to necessary scheduled maintenance, the JMIR Publications website will be unavailable from Wednesday, July 01, 2020 at 8:00 PM to 10:00 PM EST. We apologize in advance for any inconvenience this may cause you.

Who will be affected?

Accepted for/Published in: Journal of Medical Internet Research

Date Submitted: Jun 1, 2020
Date Accepted: Sep 9, 2020
Date Submitted to PubMed: Sep 11, 2020

The final, peer-reviewed published version of this preprint can be found here:

Dynamic Panel Estimate–Based Health Surveillance of SARS-CoV-2 Infection Rates to Inform Public Health Policy: Model Development and Validation

Oehmke JF, Oehmke TB, Singh L, Post L

Dynamic Panel Estimate–Based Health Surveillance of SARS-CoV-2 Infection Rates to Inform Public Health Policy: Model Development and Validation

J Med Internet Res 2020;22(9):e20924

DOI: 10.2196/20924

PMID: 32915762

PMCID: 7511227

Dynamic Panel Estimates of SARS-CoV-2 Infection Rates: Health Surveillance Informs Public Health Policy

  • James F. Oehmke; 
  • Theresa B. Oehmke; 
  • Lauren Singh; 
  • Lori Post

ABSTRACT

Background:

The Great Covid Shutdown worked when it was well implemented. Some countries completely eliminated SARS-CoV-2 while others flattened the curve. The US is more complicated due to varying social isolation policies which begs the question, when can we reopen? Reopening should be predicated on a sustained decline in Covid. Existing models of Covid-19 contagion rely on parameters such as R0 and use intensive data collection efforts, however these models use static statistical methods that do not capture all of the relevant dynamics such as varying specificity and sensitivity of diagnostic testing or asymptotic individuals unwittingly carrying the novel corona virus who are never tested. Existing Covid models use data that are subject to significant measurement error and other contaminants. Moreover, timely information is needed to improve statistical methods by extracting the information that is available from various datasets posted on websites.

Objective:

This study applies state-of-the-art statistical modeling applied to existing data on the internet to extract the best available estimates of the state-level dynamics of Covid-19 infection in the U.S.

Methods:

Dynamic panel data (DPD) models are estimated with the Arellano-Bond estimator utilizing the Generalized Method of Methods. This statistical technique allows for control of a variety of deficiencies in the existing dataset. Tests of the validity of the model and statistical technique are applied.

Results:

The results indicate 1) that the statistical approach is valid, including for determining recent changes in the pattern of infection, and 2) during the May 16-25 period the evolution of the pandemic changed with less inter-temporal persistence of the infection rate. This change represents a decline in the contagion model R value for that period, and is consistent with a ‘flattening of the curve’ but not with an imminent end to the pandemic.

Conclusions:

Opening America comes with two certainties: 1)we will be Covid-free only when there is an effective vaccine; and 2)the “social” end is going to occur before the “medical” end of the pandemic, therefore, we need improved surveillance techniques to inform our leaders how to open sections of America more safely. DPD models can support opening America in combination with the extraction of Covid data from existing websites. Clinical Trial: NA


 Citation

Please cite as:

Oehmke JF, Oehmke TB, Singh L, Post L

Dynamic Panel Estimate–Based Health Surveillance of SARS-CoV-2 Infection Rates to Inform Public Health Policy: Model Development and Validation

J Med Internet Res 2020;22(9):e20924

DOI: 10.2196/20924

PMID: 32915762

PMCID: 7511227

Download PDF


Request queued. Please wait while the file is being generated. It may take some time.

© The authors. All rights reserved. This is a privileged document currently under peer-review/community review (or an accepted/rejected manuscript). Authors have provided JMIR Publications with an exclusive license to publish this preprint on it's website for review and ahead-of-print citation purposes only. While the final peer-reviewed paper may be licensed under a cc-by license on publication, at this stage authors and publisher expressively prohibit redistribution of this draft paper other than for review purposes.

Advertisement