Data and code availability
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RNASeq data have been deposited at GEO and are publicly available as of the date of publication. Proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository are publicly available as of the date of publication. Accession numbers are listed in the key resources table. Supplementary data have been deposited at Mendeley. The DOI is listed in the key resources table. All the multi-omics datasets (Proteomic, lipidomic, serology, flow cytometry, multiplex immunoassay) are available via the Lynn Laboratory BitBucket (https://bitbucket.org/lynnlab/covirs).
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This paper does not report original code.
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Any additional information required to reanalyze the data reported in this paper is available from the lead contact upon request.