Data and code availability
- •
RNA sequencing data have been deposited at NCBI Gene Expression Omnibus and are publicly available as of the date of publication. The accession number is listed in the key resources table.
- •
The Olink, clinical, virological, and immunological data, as well as the source codes, have been deposited the GitHub repository and are publicly available as of the date of publication. The GitHub link is listed in the key resources table.
- •
Additional supplemental items are available from Mendeley Data: https://doi.org/10.17632/nzd3f5c3j4.1.
- •
Other underlying data for this paper will be shared by the lead contact upon request without restriction.