Research article

Linking dynamic patterns of COVID-19 spreads in Italy with regional characteristics: a two level longitudinal modelling approach

  • Received: 24 August 2020 Accepted: 04 March 2021 Published: 16 March 2021
  • The current statistical modeling of coronavirus (COVID-19) spread has mainly focused on spreading patterns and forecasting of COVID-19 development; these patterns have been found to vary among locations. As the survival time of coronaviruses on surfaces depends on temperature, some researchers have explored the association of daily confirmed cases with environmental factors. Furthermore, some researchers have studied the link between daily fatality rates with regional factors such as health resources, but found no significant factors. As the spreading patterns of COVID-19 development vary a lot among locations, fitting regression models of daily confirmed cases or fatality rates directly with regional factors might not reveal important relationships. In this study, we investigate the link between regional spreading patterns of COVID-19 development in Italy and regional factors in two steps. First, we characterize regional spreading patterns of COVID-19 daily confirmed cases by a special patterned Poisson regression model for longitudinal count; the varying growth and declining patterns as well as turning points among regions in Italy have been well captured by regional regression parameters. We then associate these regional regression parameters with regional factors. The effects of regional factors on spreading patterns of COVID-19 daily confirmed cases have been effectively evaluated.

    Citation: Youtian Hao, Guohua Yan, Renjun Ma, M. Tariqul Hasan. Linking dynamic patterns of COVID-19 spreads in Italy with regional characteristics: a two level longitudinal modelling approach[J]. Mathematical Biosciences and Engineering, 2021, 18(3): 2579-2598. doi: 10.3934/mbe.2021131

    Related Papers:

  • The current statistical modeling of coronavirus (COVID-19) spread has mainly focused on spreading patterns and forecasting of COVID-19 development; these patterns have been found to vary among locations. As the survival time of coronaviruses on surfaces depends on temperature, some researchers have explored the association of daily confirmed cases with environmental factors. Furthermore, some researchers have studied the link between daily fatality rates with regional factors such as health resources, but found no significant factors. As the spreading patterns of COVID-19 development vary a lot among locations, fitting regression models of daily confirmed cases or fatality rates directly with regional factors might not reveal important relationships. In this study, we investigate the link between regional spreading patterns of COVID-19 development in Italy and regional factors in two steps. First, we characterize regional spreading patterns of COVID-19 daily confirmed cases by a special patterned Poisson regression model for longitudinal count; the varying growth and declining patterns as well as turning points among regions in Italy have been well captured by regional regression parameters. We then associate these regional regression parameters with regional factors. The effects of regional factors on spreading patterns of COVID-19 daily confirmed cases have been effectively evaluated.



    加载中


    [1] X. Zhang, R. Ma, L. Wang, Predicting turning point, duration and attack rate of COVID-19 outbreaks in major Western countries, Chaos Solitons Fract., 135 (2020), 109829. doi: 10.1016/j.chaos.2020.109829
    [2] A. Feoli, A. L. Iannella, E. Benedetto, Three pictures of COVID-19 behavior in Italy: similar growth and different degrowth, medRxiv, 2000.05.09.20096149. Doi: https://doi.org/10.1101/2020.05.09.20096149.
    [3] M. F. Bashir, B. Ma, Bilal, B. Komal, M. A. Bashir, D. Tan, M. Bashir, Correlation between climate indicators and COVID-19 pandemic in New York, USA, Sci. Total Environ., 728 (2020), 138835. doi: 10.1016/j.scitotenv.2020.138835
    [4] D. N. Prata, W. Rodrigues, P. H. Bermejo, Temperature significantly changes COVID-19 transmission in (sub) tropical cities of Brazil, Sci. Total Environ., 729 (2020), 138862. doi: 10.1016/j.scitotenv.2020.138862
    [5] Y. Wu, W. Jing, J. Liu, Q. Ma, J. Yuan, Y. Wang, et al., Effects of temperature and humidity on the daily new cases and new deaths of COVID-19 in 166 countries, Sci. Total Environ., 729 (2020), 139051. doi: 10.1016/j.scitotenv.2020.139051
    [6] S. Shastri, K. Singh, S. Kumar, P. Kour, V. Mansotra, Time series forecasting of Covid-19 using deep learning models: India-USA comparative case study, Chaos Solitons Fract., 140 (2020), 110227. doi: 10.1016/j.chaos.2020.110227
    [7] R. G. da Silva, M. H. D. M. Ribeiro, V. C. Mariani, L. dos Santos Coelho, Forecasting Brazilian and American COVID-19 cases based on artificial intelligence coupled with climatic exogenous variables, Chaos Solitons Fract., 139 (2020), 110027. doi: 10.1016/j.chaos.2020.110027
    [8] A. K. Sahai, N. Rath, V. Sood, M. P. Singh, ARIMA modelling & forecasting of COVID-19 in top five affected countries, Diabetes Metab. Syndr., 14 (2020), 1419–1427. doi: 10.1016/j.dsx.2020.07.042
    [9] M. H. D. M. Ribeiro, R. G. da Silva, V. C. Mariani, L. dos Santos Coelho, Short-term forecasting COVID-19 cumulative confirmed cases: Perspectives for Brazil, Chaos Solitons Fract., 135 (2020), 109853. doi: 10.1016/j.chaos.2020.109853
    [10] A. Vena, D. R. Giacobbe, A. Di Biagio, M. Mikulska, L. Taramasso, A. De Maria, et. al., Clinical characteristics, management and in-hospital mortality of patients with coronavirus disease 2019 in Genoa, Italy, Clin. Microbiol. Infect., 26 (2020), 1537–1544. doi: 10.1016/j.cmi.2020.07.049
    [11] Z. Ceylan, Estimation of COVID-19 prevalence in Italy, Spain, and France, Sci. Total Environ., 729 (2020), 138817. doi: 10.1016/j.scitotenv.2020.138817
    [12] Q. Yang, J. Wang, H. Ma, X. Wang, Research on COVID-19 based on ARIMA model$^\Delta$—Taking Hubei, China as an example to see the epidemic in Italy, J. Infect. Public Health, 13 (2020), 1415–1418. doi: 10.1016/j.jiph.2020.06.019
    [13] A. Singhal, P. Singh, B. Lall, S. D. Joshi, Modeling and prediction of COVID-19 pandemic using Gaussian mixture model, Chaos Solitons Fract., 138 (2020), 110023. doi: 10.1016/j.chaos.2020.110023
    [14] M. Batista, Estimation of the final size of the COVID-19 epidemic, MedRxiv, 2020.02.16.20023606. Doi: https://doi.org/10.1101/2020.02.16.20023606.
    [15] H. G. Hong, Y. Li, Estimation of time-varying reproduction numbers underlying epidemiological processes: A new statistical tool for the COVID-19 pandemic, PLOS One, 15 (2020), e0236464. doi: 10.1371/journal.pone.0236464
    [16] A. Bertozzi, E. Franco, G. Mohler, M. B. Short, D. Sledge, The challenges of modeling and forecasting the spread of COVID-19, PNAS, 117 (2020), 16732–16738. doi: 10.1073/pnas.1914072117
    [17] K. Cai, W. He, G. Y. Yi, COVID-19 Fatality: A Cross-Sectional Study using Adaptive Lasso Penalized Sliced Inverse Regression, J. Data Sci., 18 (2020), 483–494.
    [18] Z. S. Ma, A Simple Mathematical Model for Estimating the Inflection Points of COVID-19 Outbreaks, medRxiv, 2020.03.25.20043893. DOI: 10.1101/2020.03.25.20043893.
    [19] Github, available from: https://github.com/pcm-dpc/COVID-19/tree/master/dati-regioni.
    [20] Wikipedia, available from: https://en.wikipedia.org/wiki/Regions_of_Italy.
    [21] Wunderground, available from: https://www.wunderground.com/history.
    [22] X. Zhang, An updated analysis of turning point, duration and attack rate of COVID-19 outbreaks in major Western countries with data of daily new cases, Data Brief, 31 (2020), 105830. doi: 10.1016/j.dib.2020.105830
    [23] L. M. Sullivan, K. A. Dukes, E. Losina, An introduction to hierarchical linear modelling, Stat. Med., 18 (1999), 855–888. doi: 10.1002/(SICI)1097-0258(19990415)18:7<855::AID-SIM117>3.0.CO;2-7
    [24] D. Bates, M. Mächler, B. Bolker, S. Walker, Fitting Linear Mixed-Effects Models Using lme4, J. Stat. Software, 67 (2015), 1–48.
    [25] J. E. Knowles, C. Frederick, merTools: Tools for Analyzing Mixed Effect Regression Models, 2020. Available from: https://CRAN.R-project.org/package=merTools.
  • Reader Comments
  • © 2021 the Author(s), licensee AIMS Press. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0)
通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索

Metrics

Article views(1952) PDF downloads(112) Cited by(0)

Article outline

Figures and Tables

Figures(11)  /  Tables(4)

Other Articles By Authors

/

DownLoad:  Full-Size Img  PowerPoint
Return
Return

Catalog