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Original Artikel |
Datum |
Titel |
Autoren Max. 6 Autoren |
| 1 |
[GO] |
2025―Jan―08 |
Two coding-complete genomes of porcine reproductive and respiratory syndrome virus 2 (PRRSV-2) from field clinical samples in the Philippines |
Andrew Montecillo, Jimwel Bryan Christopher Ferrer, Zyne Baybay, Ruffa Maze Balmes, Roselle Falconite-Cudal, Mary Grace Alba, Karl Alexander Fabros, Timothy James Dela Paz, Lucille C. Villegas, Wreahlen Cariaso, Homer Pantua, Simon Roux |
| 2 |
[GO] |
2024―Nov―12 |
Genomic surveillance of SARS-CoV-2 in Nepal |
Binod Khadka, Rajindra Napit, Kathie A. Mihindukulasuriya, Smita Shrestha, Ramanuj Rauniyar, Eans T. Tuladhar, Lindsay Droit, Anne M. Paredes, Runa Jha, Roji Raut, Bimalesh K. Jha, Scott A. Handley, Annie Elong-Ngono, Sujan Shresta, David Wang, Krishna D. Manandhar, John J. Dennehy |
| 3 |
[GO] |
2024―Jun―07 |
Setu: a pipeline for the robust assembly of SARS-CoV-2 genomes |
Nityendra Shukla, Neha Srivastava, Prachi Srivastava, Jitendra Narayan, Simon Roux |
| 4 |
[GO] |
2024―Apr―24 |
Coding-complete genomes of 18 SARS-CoV-2 Omicron JN.1, JN.1.4, and JN.1.11 sub-lineages in Bangladesh |
Anika Tahsin, Mahin Hasan, Saikt Rahman, Mohammad Jubair, Mokibul Hassan Afrad, Manjur Hossain Khan, Md Shaheen Alam, Mst Noorjahan Begum, Md Yeasir Karim, Sharmin Aktar Mukta, Mohammad Tanbir Habib, Ahmed Nawsher Alam, Emran Kabir Chowdhury, Md Rofiqur Rahman, Edward T. Ryan, Tahmina Shirin, Mustafizur Rahman, Firdausi Qadri, Simon Roux |
| 5 |
[GO] |
2024―Apr―23 |
Emergence of SARS-CoV-2 Omicron sub-lineage JN.1 in Bangladesh |
Manjur Hossain Khan Jony, Ahmed Nawsher Alam, Md. Abdullah Omar Nasif, Sharmin Sultana, Rubaid Anwar, Mithun Rudra, Mahbubur Rahman, Mustafizur Rahman, Firdausi Qadri, Tahmina Shirin, Kenneth M. Stedman |
| 6 |
[GO] |
2024―Mrz―25 |
Coding-complete genomic sequence of a rhinovirus C-32 in a human nasal swab sample that tested false positive in a SARS-CoV-2 antigen test |
Tracey L. Moquin, Kuttichantran Subramaniam, John A. Lednicky, John J. Dennehy |
| 7 |
[GO] |
2024―Mrz―19 |
Genome sequencing of severe acute respiratory syndrome COVID-19 EF.1 variant strain obtained from a Moroccan patient |
Lahcen Ouchari, Mouhssine Hemlali, Hamza Ghammaz, Taha Chouati, Marouane Melloul, Sanaâ Alaoui Amine, Safaa Rhoulam, Hicham Elannaz, Nadia Touil, Khalid Ennibi, Elmostafa El Fahime, Simon Roux |
| 8 |
[GO] |
2024―Feb―27 |
Whole-genome sequencing of SARS-CoV-2 from the initial cases of domestic cat infections in Canada |
Asma Sultana, Dorothee Bienzle, Scott Weese, Brad Pickering, Peter Kruczkiewicz, Greg Smith, Mathieu Pinette, Oliver Lung, Simon Roux |
| 9 |
[GO] |
2023―Sep―05 |
Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh |
Saikt Rahman, Mohammad Tanbir Habib, Mokibul Hassan Afrad, Mahin Hasan, Anika Tahsin, Mohammad Jubair, Manjur Hossain Khan, Ahmed Nawsher Alam, Emran Kabir Chowdhury, Mustafizur Rahman, Edward Thomas Ryan, Tahmina Shirin, Firdausi Qadri, Simon Roux |
| 10 |
[GO] |
2023―Jun―13 |
Complete Coding Sequence of a Lineage AY.122 SARS-CoV-2 Virus Strain Detected in Kazakhstan |
Bekbolat Usserbayev, Yergali Abduraimov, Nurlan Kozhabergenov, Aibarys Melisbek, Meirzhan Shirinbekov, Manar Smagul, Gaukhar Nusupbaуeva, Aziz Nakhanov, Yerbol Burashev, John J. Dennehy |
| 11 |
[GO] |
2023―Mai―24 |
Coding-Complete Genome Sequences of an Omicron Subvariant (BA.5.2.20) of SARS-CoV-2 |
Zineb Rhazzar, Mouhssine Hemlali, Marouane Melloul, Maha Ouarab, Omar Nyabi, Mostafa Elouennass, Elmostafa El Fahime, Nadia Touil, Jean-Luc Gala, Khalid Ennibi, John J. Dennehy |
| 12 |
[GO] |
2023―Mai―03 |
Complete Genome Sequence of a Bovine Coronavirus Isolated from a Goat in Pennsylvania, USA |
Shubhada K. Chothe, Maurice Byukusenge, Manoj K. Sekhwal, Lingling Li, Lindsey Cecelia LaBella, Padmaja Jakka, Kay Palchak, Rhiannon Barry, Michele Yon, Ruth H. Nissly, Kathleen M. Kelly, Bhushan M. Jayarao, Meera Surendran Nair, Suresh V. Kuchipudi, Simon Roux |
| 13 |
[GO] |
2023―Mai―01 |
Erratum for Rondeau et al., “Accessible and Validated Processing of SARS-CoV-2 from Wastewater” |
Nicole C. Rondeau, Oliver J. Rose, Lina A. Ariyan, Brian J. Mailloux, JJ L. Miranda |
| 14 |
[GO] |
2023―Feb―13 |
Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced |
Lori Wong, Christopher Randolph, Emily Kanwischer, Ashton Ingold, Bobby L. Boyanton, Jay Taylor, Rachel A. Frenner, Susan E. Harley, Jordan T. Bird, Timothy J. Thurman, Sangam Kandel, David W. Ussery, Stephanie D. Byrum, Darrell Dinwiddie, Daryl Domman, Uday K. Chalwadi, Joshua Kennedy, John J. Dennehy |
| 15 |
[GO] |
2023―Feb―13 |
Coding-Complete Genome Sequences of 40 SARS-CoV-2 Omicron XBB, XBB.1, and XBB.2 Sublineage Strains in Bangladesh |
Mohammad Tanbir Habib, Mokibul Hassan Afrad, Saikt Rahman, Manjur Hossain Khan, Mohammad Moajjam Hossain, Farhana Khanam, Nicholas R. Thomson, Tahmina Shirin, Firdausi Qadri, John J. Dennehy |
| 16 |
[GO] |
2022―Dez―12 |
Genome Sequences of SARS-CoV-2 Strains from the Republic of Moldova |
Mariana Ulinici, Martín Soñora, Emanuele Orsini, Danilo Licastro, Simeone Dal Monego, Mihail Todiras, Ludmila Lungu, Stanislav Groppa, Alessandro Marcello, Simon Roux |
| 17 |
[GO] |
2022―Dez―06 |
Genome Sequences of 23 SARS-CoV-2 Omicron-Lineage Strains from Bangladesh |
Mohabbat Hossain, Omar Hamza Bin Manjur, Lincon Hasda, Mohammad Tanbir Habib, Mokibul Hassan Afrad, Manjur Hossain Khan, Nandita Banik, Nawroz Afreen, Ahmed Nawsher Alam, Mustak Ibn Ayub, Mohammed Ziaur Rahman, Mustafizur Rahman, Farhana Khanam, Sayera Banu, Nicholas R. Thomson, Tahmina Shirin, Firdausi Qadri, Simon Roux |
| 18 |
[GO] |
2022―Nov―30 |
Genome Sequence of a Recombinant SARS-CoV-2 Lineage XAM (BA.1.1/BA.2.9) Strain from a Clinical Sample in Santo Domingo, Dominican Republic |
Robert Paulino-Ramírez, Kien Pham, Mallery I. Breban, Armando Peguero, Maridania Jabier, Nelissa Sánchez, Iscania Eustate, Ingrid Ruiz, Nathan D. Grubaugh, Anne M. Hahn, John J. Dennehy |
| 19 |
[GO] |
2022―Nov―14 |
Coding Complete Genome Sequence of the SARS-CoV-2 Virus Strain, Variant B.1.1, Sampled from Kazakhstan |
Yerbol Burashev, Bekbolat Usserbayev, Lespek Kutumbetov, Yergali Abduraimov, Markhabat Kassenov, Aslan Kerimbayev, Balzhan Myrzakhmetova, Aibarys Melisbek, Meirzhan Shirinbekov, Saken Khaidarov, Edan R. Tulman, John J. Dennehy |
| 20 |
[GO] |
2022―Okt―19 |
Genome Sequence of Bovine Coronavirus Variants from the Nasal Virome of Irish Beef Suckler and Pre-weaned Dairy Calves Clinically Diagnosed with Bovine Respiratory Disease |
Kerrie Ní Dhufaigh, Matthew McCabe, Paul Cormican, Inmaculada Cuevas-Gomez, Mark McGee, Tara McDaneld, Bernadette Earley, Simon Roux |
| 21 |
[GO] |
2022―Okt―17 |
Genome Sequence of an Early Imported Case of SARS-CoV-2 Delta Variant (B.1.617.2 AY.122) in Iraq in April 2021 |
Nihad A. M. Al-Rashedi, Hussein Alburkat, Murad G. Munahi, Ali H. Jasim, Batool Kadham Salman, Basel Saber Oda, Abbas Abd-Alsahib Mossa, Ahmed Abdulrazzaq Abbas, Olli Vapalahti, Tarja Sironen, Teemu Smura, Simon Roux |
| 22 |
[GO] |
2022―Aug―23 |
Near-Complete Genome Sequence of a SARS-CoV-2 Variant B.1.1.7 Virus Strain Isolated in Kazakhstan |
Bekbolat Usserbayev, Kunsulu Zakarya, Lespek Kutumbetov, Mukhit Orynbaуev, Kulyaisan Sultankulova, Yergali Abduraimov, Balzhan Myrzakhmetova, Kuandyk Zhugunissov, Aslan Kerimbayev, Aibarys Melisbek, Meiіrzhan Shirinbekov, Saken Khaidarov, Asankadyr Zhunushov, Yerbol Burashev, John J. Dennehy |
| 23 |
[GO] |
2022―Aug―16 |
Complete Genome Sequence of an Italian Swine Enteric Coronavirus Strain 77590/2019 |
Alice Papetti, Paolo Bonilauri, Chiara Chiapponi, Laura Baioni, Maria Beatrice Boniotti, Simon Roux |
| 24 |
[GO] |
2022―Jul―19 |
Near-Full-Length Genome Sequences Representing an Event of Zooanthroponotic Transmission of SARS-CoV-2 Lineage B.1.189 in Mexico during 2020 |
Roberto Navarro-Lopez, Mario Solis-Hernandez, Marisol K. Rocha-Martinez, Samantha Eberl, Ninnet Gomez-Romero, Lauro Velazquez-Salinas, J. Guillermo Estrada-Franco, John J. Dennehy |
| 25 |
[GO] |
2022―Jul―11 |
Co-circulation of Multiple SARS-CoV-2 Variants of Concern in Dhaka, Bangladesh, during the Second Wave of the COVID-19 Pandemic |
M. Abdullah Omar Nasif, Nahida Sultana, Raad Rahmat, Tahmina Akther, Afzalun Nessa, Munira Jahan, Simon Roux |
| 26 |
[GO] |
2022―Jun―08 |
Gut Microbiome 16S rRNA Gene Amplicon Taxonomic Profiling of Hospitalized Moroccan COVID-19 Patients |
Sofia Sehli, Abdellah Idrissi Azami, Nouzha Dini, Nihal Habib, Bouchra Chaouni, Salsabil Hamdi, Najib Al Idrissi, Saaid Amzazi, Imane Allali, Chakib Nejjari, Hassan Ghazal, Jelle Matthijnssens |
| 27 |
[GO] |
2022―Mai―31 |
Genome Sequencing of Omicron Variants of SARS-CoV-2 Circulating in Bangladesh during the Third Wave of the COVID-19 Pandemic |
Munira Jahan, M. Abdullah Omar Nasif, Raad Rahmat, SM Rashed Ul Islam, Saif Ullah Munshi, M. Sharfuddin Ahmed, Simon Roux |
| 28 |
[GO] |
2022―Mai―31 |
Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
Opeyemi U. Lawal, Linkang Zhang, Valeria R. Parreira, R. Stephen Brown, Charles Chettleburgh, Nora Dannah, Robert Delatolla, Kimberly A. Gilbride, Tyson E. Graber, Golam Islam, James Knockleby, Sean Ma, Hanlan McDougall, R. Michael McKay, Aleksandra Mloszewska, Claire Oswald, Mark Servos, Megan Swinwood-Sky, Gustavo Ybazeta, Marc Habash, Lawrence Goodridge, Simon Roux |
| 29 |
[GO] |
2022―Apr―14 |
Coding-Complete Sequence of a SARS-CoV-2 Strain from an Omicron (B.1.1.529+BA.1) Variant Detected in Morocco |
Taha Chouati, Mouhssine Hemlali, Marouane Melloul, Sanaa Alaoui-Amine, Safae Rhoulam, Hamza Ghamaz, Maha Ouarab, Omar Askander, Lamiae Belayachi, Nadia Touil, Bouchra El Mchichi, Hicham Elannaz, Abdelillah Laraqui, Mostafa Elouennass, Khalid Ennibi, Elmostafa El Fahime, Simon Roux |
| 30 |
[GO] |
2022―Apr―13 |
Report of SARS-CoV-2 BA.1 Lineage in Morocco |
Safae El Mazouri, Houda Bendani, Nasma Boumajdi, Mhammed Chaoui Roqai, Tarik Aanniz, Myriam Seffar, Hakima Kabbaj, Ghizlane El Amin, Amal Zouaki, Saaïd Amzazi, Mouna Ouadghiri, Lahcen Belyamani, Azeddine Ibrahimi, Simon Roux |
| 31 |
[GO] |
2022―Mrz―28 |
Genome Sequences of 408 SARS-CoV-2 Strains Obtained from Nasopharyngeal Swabs in La Araucanía Region, Southern Chile |
Michel Abanto Marin, Benjamín Leyton-Carcaman, Claudio Vázquez, Benjamín Durán-Vinet, Katterin Bobadilla, Claudio Rodriguez-Ruiz, Andrés San Martín, Pía Riquelme, Fernando Baez, María José Carrasco, Gloria Rodríguez-Moretti, Álvaro Cerda, Nicolás Saavedra, María de la Luz Mora, John J. Dennehy |
| 32 |
[GO] |
2022―Mrz―24 |
Genome Sequences of 25 SARS-CoV-2 Sublineage B.1.1.529 Omicron Strains in Bangladesh |
Omar Hamza Bin Manjur, Mokibul Hassan Afrad, Manjur Hossain Khan, Mohabbat Hossain, Zannat Kawser, Ahmed Nawsher Alam, Nandita Banik, Saruar Alam, Mallick Masum Billah, Nawroz Afreen, Farhana Khanam, Taufiqur Rahman Bhuiyan, Mohammed Ziaur Rahman, Emilie Westeel, Jean-Luc Berland, Florence Komurian-Pradel, Sayera Banu, Mustafizur Rahman, Nicholas R. Thompson, Firdausi Qadri, Tahmina Shirin, Simon Roux |
| 33 |
[GO] |
2022―Feb―03 |
Coding-Complete Genome Sequences of a Delta Subvariant (AY.33) of SARS-CoV-2 Obtained from Moroccan COVID-19 Patients |
Mouhssine Hemlali, Taha Chouati, Hamza Ghammaz, Marouane Melloul, Sanaâ Alaoui Amine, Safaa Rhoulam, Nadia Touil, Khalid Ennibi, Hicham Oumzil, Rhajaoui Mohamed, Aguenaou Hassan, Elmostafa El Fahime, Simon Roux |
| 34 |
[GO] |
2022―Feb―03 |
SARS-CoV-2 Genome Sequence Obtained from Ethiopia |
Molalegne Bitew, Getnet Hailu, Yakob Gebregziabher Tsegay, Keyru Tuki, Kominist Asmamaw, Kassahun Tesfaye, Hailu Dadi, Emanuele Orsini, Simeone Dal Monego, Danilo Licastro, Alessandro Marcello, Simon Roux |
| 35 |
[GO] |
2022―Feb―03 |
Identification of the First SARS-CoV-2 Lineage B.1.1.529 Virus Detected in Europe |
Bert Vanmechelen, Anne-Sophie Logist, Tony Wawina-Bokalanga, Jens Verlinden, Joan Martí-Carreras, Caspar Geenen, Bram Slechten, Lize Cuypers, Emmanuel André, Guy Baele, Piet Maes, Simon Roux |
| 36 |
[GO] |
2022―Jan―27 |
Genome Sequencing of Wastewater Confirms the Arrival of the SARS-CoV-2 Omicron Variant at Frankfurt Airport but Limited Spread in the City of Frankfurt, Germany, in November 2021 |
Shelesh Agrawal, Laura Orschler, Simona Tavazzi, Robert Greither, Bernd Manfred Gawlik, Susanne Lackner, Simon Roux |
| 37 |
[GO] |
2022―Jan―27 |
Whole-Genome Sequencing of SARS-CoV-2 Strains from Asymptomatic Individuals in India |
Ambica Rangaiah, Sathyanarayan Muthur Shankar, Shashiraja Padukone, Kusuma Gowdra Rangappa, Shantala Gowdara Basawarajappa, Jelle Matthijnssens |
| 38 |
[GO] |
2021―Dez―09 |
SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh |
Mizanur Rahman, Rummana Rahim, Abu Hasan, Naoko Kawai, Lavel Chinyama Moonga, Tatsuki Sugi, Kyoko Hayashida, Junya Yamagishi, John J. Dennehy |
| 39 |
[GO] |
2021―Dez―02 |
Genome Sequencing of the SARS-CoV-2 Delta (B.1.617.2) Variant of Concern Detected in Bangladesh |
Tanjina Akhtar Banu, M. Murshed Hasan Sarkar, Shahina Akter, Barna Goswami, Iffat Jahan, Eshrar Osman, Mohammad Samir Uzzaman, M. Ahashan Habib, Abu Sayeed Mohammad Mahmud, Mohammad Mohi Uddin, Tasnim Nafisa, M. Maruf Ahmed Molla, Mahmuda Yeasmin, Arifa Akram, M. Salim Khan, Jelle Matthijnssens |
| 40 |
[GO] |
2021―Dez―02 |
Coding-Complete Genome Sequences of Alpha and Delta SARS-CoV-2 Variants from Kamphaeng Phet Province, Thailand, from May to July 2021 |
Kanyarat Phutthasophit, Darunee Buddhari, Piyawan Chinnawirotpisan, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, Thitiman Kaewkao, Narong Mahayos, Rotjana Khontong, Sopon Iamsirithaworn, Anthony R. Jones, Aaron R. Farmer, Stefan Fernandez, Chonticha Klungthong, Simon Roux |
| 41 |
[GO] |
2021―Nov―24 |
Whole-Genome Sequences of SARS-CoV-2 Isolates from the Dominican Republic |
R. Paulino-Ramirez, E. Riego, A. Vallejo-Degaudenzi, V. V. Calderon, L. Tapia, Patricia León, Danilo Licastro, Simeone Dal Monego, Sreejith Rajasekharan, Emanuele Orsini, Alessandro Marcello, Simon Roux |
| 42 |
[GO] |
2021―Nov―24 |
Coding-Complete Genome Sequence of a SARS-CoV-2 Variant Obtained from Raw Sewage at the University of Tennessee-Knoxville Campus |
K. T. Ash, I. Alamilla, Y. Li, D. C. Joyner, D. E. Williams, P. J. McKay, B. M. Green, C. Iler, S. E. DeBlander, F. Kara-Murdoch, C. M. Swift, T. C. Hazen, Simon Roux |
| 43 |
[GO] |
2021―Okt―21 |
Complete Genome Sequence of Bovine Coronavirus in Blood Diarrhea from Adult Cattle That Died from Winter Dysentery in Japan |
Keisuke Nakagawa, Hitomi Kumano, Yuko Kitamura, Keisuke Kuwata, Eiji Tanaka, Hideto Fukushi, Jelle Matthijnssens |
| 44 |
[GO] |
2021―Okt―21 |
Genome Sequences of SARS-CoV-2 Sublineage B.1.617.2 Strains from 12 Children in Chattogram, Bangladesh |
Adnan Mannan, H. M. Hamidullah Mehedi, M. Abdur Rob, Sanjoy Kanti Biswas, Nahid Sultana, Rajdeep Biswas, M. Minhazul Hoque, Mohammed Akram Hossain, Ajoy Das, Kallyan Chakma, Asma Salauddin, M. Thosif Raza, Fahim Hasan Reza, Azmain Mahtab, Mojnu Miah, Rashedul Hasan, Mustafizur Rahman, Mohammed Ziaur Rahman, Mohammad Enayet Hossain, Simon Roux |
| 45 |
[GO] |
2021―Okt―07 |
Genome Sequences of Community SARS-CoV-2 B.1.526 and P.1 Variants Circulating in the Dominican Republic |
Robert Paulino-Ramirez, Victor Virgilio Calderon, Alejandro Vallejo Degaudenzi, Simon Roux |
| 46 |
[GO] |
2021―Sep―23 |
Whole-Genome Sequences of SARS-CoV-2 Isolates from Ethiopian Patients |
Dawit Hailu Alemayehu, Bethlehem Adnew, Fekadu Alemu, Dessalegn Abeje Tefera, Tamrayehu Seyoum, Getachew Tesfaye Beyene, Tesfaye Gelanew, Abel Abera Negash, Markos Abebe, Adane Mihret, Abebe Genetu Bayih, Alemseged Abdissa, Andargachew Mulu, Simon Roux |
| 47 |
[GO] |
2021―Sep―16 |
Draft Genome Sequence of a Multidrug-Resistant Escherichia coli Sequence Type 1193 Pandemic Clone Isolated from Wastewater in Austria |
Adriana Cabal, Nadine Peischl, Gerhard Rab, Anna Stöger, Burkhard Springer, Jasmin Sucher, Franz Allerberger, Werner Ruppitsch, Frank J. Stewart |
| 48 |
[GO] |
2021―Sep―02 |
Coding-Complete Sequence of a SARS-CoV-2 B.1.1.25 Lineage Obtained from an 8-Day-Old Deceased Neonate |
Muntasir Alam, M. Ishrat Jahan, Shafina Jahan, Dianna M. Blau, Afruna Rahman, Mohammed Ziaur Rahman, Mohammad Zahid Hossain, Emily S. Gurley, Shams El Arifeen, Mustafizur Rahman, John J. Dennehy |
| 49 |
[GO] |
2021―Aug―19 |
Phylogenetically Distinct Near-Complete Genome Sequences of Porcine Reproductive and Respiratory Syndrome Virus Type 2 Variants from Four Distinct Disease Outbreaks at U.S. Swine Farms over the Past 6 Years |
Declan C. Schroeder, Nkechi M. Odogwu, Jessica Kevill, My Yang, Venkatramana D. Krishna, Mariana Kikuti, Nakarin Pamornchainavakul, Carles Vilalta, Juan Sanhueza, Cesar A. Corzo, Albert Rovira, Scott Dee, Eric Nelson, Aaron Singrey, Perle Zhitnitskiy, Cecilia Balestreri, Dennis N. Makau, Igor A. D. Paploski, Maxim C.-J. Cheeran, Kimberly VanderWaal, Montserrat Torremorell, Kenneth M. Stedman |
| 50 |
[GO] |
2021―Aug―05 |
Whole-Genome Sequences of SARS-CoV-2 Lineage B.1.525 Strains (Variant η) Detected from Patients in the Abruzzo Region (Central Italy) during Spring 2021 |
Emiliano Delli Compagni, Iolanda Mangone, Barbara Bonfini, Annapia Di Gennaro, Liana Teodori, Alessandra Leone, Claudia Casaccia, Ottavio Portanti, Daniela Averaimo, Katiuscia Zilli, Daniela Malatesta, Massimo Ancora, Silvia Scialabba, Marco Di Domenico, Alessio Lorusso, Simon Roux |
| 51 |
[GO] |
2021―Aug―05 |
Near-Complete Genome Sequences of Nine SARS-CoV-2 Strains Harboring the D614G Mutation in Malaysia |
Ummu Afeera Zainulabid, Norhidayah Kamarudin, Ahmad Hafiz Zulkifly, Han Ming Gan, Darren Dean Tay, Shing Wei Siew, Aini Syahida Mat Yassim, Sharmeen Nellisa Soffian, Ahmad Afif Mohd Faudzi, Ahmad Mahfuz Gazali, Gaanty Pragas Maniam, Hajar Fauzan Ahmad, Simon Roux |
| 52 |
[GO] |
2021―Jul―22 |
Genomic Surveillance of SARS-CoV-2 Viruses Collected during the Ending Phase of the First Wave of the COVID-19 Pandemic in Bangladesh |
Munira Jahan, Arittra Bhattacharjee, Raad Rahmat, S. M. Rashedul Islam, Tahmina Akhter, Ishtiaque Ahammad, Mohammad Uzzal Hossain, Saif Ullah Munshi, M. Salimullah, Simon Roux |
| 53 |
[GO] |
2021―Jul―15 |
Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines |
John Mark Velasco, Piyawan Chinnawirotpisan, Maria Theresa Valderama, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, Paula Corazon Diones, Fatima Claire Navarro, Vicente Vila, Henry Tabinas, Domingo Chua, Stefan Fernandez, Anthony Jones, Chonticha Klungthong, Simon Roux |
| 54 |
[GO] |
2021―Jul―15 |
Genome Sequences of 15 SARS-CoV-2 Sublineage B.1.617.2 Strains in Bangladesh |
Mokibul Hassan Afrad, Manjur Hossain Khan, Sadia Isfat Ara Rahman, Omar Hamza Bin Manjur, Mohabbat Hossain, Ahmed Nawsher Alam, Farzana Islam Khan, Nawroz Afreen, Farsim Tarannum Haque, Nicholas R. Thomson, Tahmina Shirin, Firdausi Qadri, Jelle Matthijnssens |
| 55 |
[GO] |
2021―Jul―08 |
Genome Sequences of Two Novel Coronavirus (SARS-CoV-2) Isolates from Dhaka, Bangladesh |
M. Abdul Matin, Abdullah Al Nahid, Bishajit Sarkar, M. Asad Ullah, Yusha Araf, Nihad Adnan, Rashedul Islam, Mohammad Shahedur Rahman, Jelle Matthijnssens |
| 56 |
[GO] |
2021―Jul―08 |
Genome Sequence of a SARS-CoV-2 P.1 Variant of Concern (20J/501Y.V3) from Bangladesh |
M. Murshed Hasan Sarkar, Mohammad Fazle Alam Rabbi, Shahina Akter, Tanjina Akhtar Banu, Barna Goswami, Iffat Jahan, M. Saddam Hossain, Eshrar Osman, Mohammad Samir Uzzaman, M. Ahashan Habib, Abu Sayeed Mohammad Mahmud, Firoz Kabir, Kazi Nadim Hasan, M. Mizanur Rahman, M. Abdul Khaleque, Sharif Akhteruzzaman, M. Salim Khan, Simon Roux |
| 57 |
[GO] |
2021―Jul―01 |
New SARS-CoV-2 Variant from Jordan |
Lo’ai Alanagreh, Mustafa Ababneh, Abdel-Ellah Al-Shudifat, Mai Ajlouny, Hanan Abu-Shaikh, Foad Alzoughool, Mohammad-Borhan Al-zghoul, Manar Atoum, Azmi Mahafzeh, John J. Dennehy |
| 58 |
[GO] |
2021―Jun―11 |
Accessible and Validated Processing of SARS-CoV-2 from Wastewater |
Nicole C. Rondeau, Oliver J. Rose, Lina A. Ariyan, Brian J. Mailloux, JJ L. Miranda, Irene L. G. Newton |
| 59 |
[GO] |
2021―Jun―11 |
Genome Sequences of SARS-CoV-2 P.1 (Variant of Concern) and P.2 (Variant of Interest) Identified in Uruguay |
Yanina Panzera, Natalia Goñi, Lucía Calleros, Natalia Ramos, Sandra Frabasile, Ana Marandino, Gonzalo Tomás, Claudia Techera, Sofía Grecco, Eddie Fuques, Viviana Ramas, Leticia Coppola, María Rosa Flieller, Noelia Morel, María Noel Cortinas, Cristina Mogdasy, Juan Arbiza, Adriana Delfraro, Ruben Pérez, Héctor Chiparelli, Simon Roux |
| 60 |
[GO] |
2021―Jun―11 |
Complete Coding Genome Sequence of a Novel Porcine Reproductive and Respiratory Syndrome Virus 2 Restriction Fragment Length Polymorphism 1-4-4 Lineage 1C Variant Identified in Iowa, USA |
Giovani Trevisan, Ganwu Li, Cesar A. A. Moura, Katie Coleman, Pete Thomas, Jianqiang Zhang, Philip Gauger, Michael Zeller, Daniel Linhares, Kenneth M. Stedman |
| 61 |
[GO] |
2021―Jun―09 |
Metatranscriptomic Analysis Reveals SARS-CoV-2 Mutations in Wastewater of the Frankfurt Metropolitan Area in Southern Germany |
Shelesh Agrawal, Laura Orschler, Susanne Lackner, Simon Roux |
| 62 |
[GO] |
2021―Mai―30 |
Genome Sequencing Identified a SARS-CoV-2 Lineage B.1.1.7 Strain with a High Number of Mutations from Dhaka, Bangladesh |
Razib Mazumder, Ahmed Abdullah, Mohammad Enayet Hossain, M. Mahfuzur Rahman, Omar Hamza Bin Manjur, Mustafizur Rahman, Dinesh Mondal, John J. Dennehy |
| 63 |
[GO] |
2021―Mai―28 |
Genome Sequence of a SARS-CoV-2 VUI 202012/01 Strain Identified from a Patient Returning from London, England, to the Apulia Region of Italy |
Daniela Loconsole, Anna Sallustio, Marisa Accogli, Francesca Centrone, Loredana Capozzi, Laura Del Sambro, Antonio Parisi, Maria Chironna, Simon Roux |
| 64 |
[GO] |
2021―Mai―19 |
Complete Genome Sequence of a SARS-CoV-2 Strain Sampled in Morocco in May 2020, Obtained Using Sanger Sequencing |
Abderrazak Rfaki, Nadia Touil, Mouhssine Hemlali, Sanaâ Alaoui Amine, Marouane Melloul, Moulay Abdelaziz El Alaoui, Hicham Elannaz, Amine Idriss Lahlou, Mostafa Elouennass, Khalid Ennibi, Elmostafa El Fahime, Simon Roux |
| 65 |
[GO] |
2021―Mai―05 |
Detection and Genome Sequencing of SARS-CoV-2 Variants Belonging to the B.1.1.7 Lineage in the Philippines |
Francis A. Tablizo, Cynthia P. Saloma, Marc Jerrone R. Castro, Kenneth M. Kim, Maria Sofia L. Yangzon, Carlo M. Lapid, Benedict A. Maralit, Marc Edsel C. Ayes, Jan Michael C. Yap, Jo-Hannah S. Llames, Shiela Mae M. Araiza, Kris P. Punayan, Irish Coleen A. Asin, Candice Francheska B. Tambaoan, Asia Louisa U. Chong, Karol Sophia Agape R. Padilla, Rianna Patricia S. Cruz, El King D. Morado, Joshua Gregor A. Dizon, Eva Maria Cutiongco-de la Paz, Alethea R. de Guzman, Razel Nikka M. Hao, Arianne A. Zamora, Devon Ray Pacial, Juan Antonio R. Magalang, Marissa Alejandria, Celia Carlos, Anna Ong-Lim, Edsel Maurice Salvaña, John Q. Wong, Jaime C. Montoya, Maria Rosario Singh-Vergeire, Simon Roux |
| 66 |
[GO] |
2021―Apr―21 |
Report of SARS-CoV-2 B1.1.7 Lineage in Morocco |
Mouna Ouadghiri, Tarik Aanniz, Abdelomunim Essabbar, Myriam Seffar, Hakima Kabbaj, Ghizlane El Amin, Amal Zouaki, Saaïd Amzazi, Lahcen Belyamani, Azeddine Ibrahimi, John J. Dennehy |
| 67 |
[GO] |
2021―Apr―14 |
Whole-Genome Sequence of Avian coronavirus from a 15-Year-Old Sample Confirms Evidence of GA08-like Strain Circulation 4 Years Prior to Its First Reported Outbreak |
Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Jelle Matthijnssens |
| 68 |
[GO] |
2021―Apr―14 |
Genome Sequences of Three SARS-CoV-2 ORF7a Deletion Variants Obtained from Patients in Hong Kong |
Herman Tse, Sally Cheuk-Ying Wong, Ka-Fai Ip, Vincent Chi-Chung Cheng, Kelvin Kai-Wang To, David Christopher Lung, Garnet Kwan-Yue Choi, John J. Dennehy |
| 69 |
[GO] |
2021―Apr―14 |
Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing |
Kayzad Nilgiriwala, Ayan Mandal, Grishma Patel, Tejal Mestry, Smriti Vaswani, Ambreen Shaikh, Kalpana Sriraman, Swapneil Parikh, Shreevatsa Udupa, Nirjhar Chatterjee, Jayanthi Shastri, Nerges Mistry, Simon Roux |
| 70 |
[GO] |
2021―Mrz―31 |
Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh |
M. Imranul Hoq, Robiul Hasan Bhuiyan, M. Khondakar Raziur Rahman, Imam Hossen, Sajib Rudra, M. Arif Hossain, Shanta Paul, M. Omer Faruq, Mohammad Omar Faruque, H. M. Abdullah Al Masud, Simon Roux |
| 71 |
[GO] |
2021―Mrz―31 |
Coding-Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Gilgit, Pakistan |
Aneela Javed, Saifullah Khan Niazi, Eijaz Ghani, Maham Yamin, Muhammad Saqib, Hussnain A. Janjua, Ali Zohaib, Simon Roux |
| 72 |
[GO] |
2021―Mrz―24 |
Genome Sequences of Three SARS-CoV-2 P.1 Strains Identified from Patients Returning from Brazil to Italy |
Emiliano Delli Compagni, Lucija Jurisic, Marialuigia Caporale, Federico Bacà, Silvia Scialabba, Sara Fanì, Alessia Perullo, Michela Toro, Alice Marchegiano, Michele Martino, Daniela Di Giacomo, Teresa Romualdi, Serena Verzulli, Eugenia Ciarrocchi, Barbara Secondini, Marta Di Giuseppe, Roberta Irelli, Alessio Di Lorenzo, Fabrizia Valleriani, Shadia Berjaoui, Ilaria Puglia, Valentina Curini, Iolanda Mangone, Alessio Lorusso, Simon Roux |
| 73 |
[GO] |
2021―Mrz―24 |
Near-Complete Genome Sequence of a SARS-CoV-2 VOC 202012/01 Strain in Peru |
C. Padilla-Rojas, L. Barcena-Flores, K. Vega-Chozo, M. Galarza-Perez, H. Bailon-Calderon, P. Lope-Pari, J. Balbuena-Torres, M. Huaringa-Nuñez, O. Caceres-Rey, N. Rojas-Serrano, John J. Dennehy |
| 74 |
[GO] |
2021―Mrz―17 |
First Report of a SARS-CoV-2 Genome Sequence with a Spike His69-Val70 Deletion and an Asn439Lys Mutation in Morocco |
Tarik Aanniz, Mouna Ouadghiri, Mohammed Amine Bendahou, Mohammed Walid Chemao-Elfihri, Mohamed Chenaoui, Hanae Dakka, Afaf Allaoui, Otmane Touzani, Amina Benaouda, Bouchra Belefquih, Saaïd Amzazi, Lahcen Belyamani, Azeddine Ibrahimi, Simon Roux |
| 75 |
[GO] |
2021―Mrz―10 |
Coding-Complete Genome Sequences and Mutation Profiles of Nine SARS-CoV-2 Strains Detected from COVID-19 Patients in Bangladesh |
Nihad Adnan, Mohib Ullah Khondoker, M. Shaminur Rahman, M. Firoz Ahmed, Shahana Sharmin, Nadim Sharif, Nafisa Azmuda, Salma Akter, Shamsun Nahar, Taslin Jahan Mou, Mahfuza Marzan, Syeda Moriam Liza, Nowshin Jahan, Tamanna Ali, Shahad Saif Khandker, Maha Jamiruddin, Mousumi Akter Chaity, Laura Grace Caller, M. Ahsanul Haq, Mohd Raeed Jamiruddin, John J. Dennehy |
| 76 |
[GO] |
2021―Mrz―10 |
Coding-Complete Genome Sequence and Phylogenetic Relatedness of a SARS-CoV-2 Strain Detected in March 2020 in Cameroon |
Richard Njouom, Serge Alain Sadeuh-Mba, Jules Tchatchueng, Moussa Moïse Diagne, Ndongo Dia, Paul Alain Ngoupo Tagnouokam, Yap Boum, Achta Hamadou, Linda Esso, Ousmane Faye, Mathurin Cyrille Tejiokem, Marie Claire Okomo, Alain Etoundi, Elisabeth Carniel, Sara Eyangoh, Simon Roux |
| 77 |
[GO] |
2021―Mrz―03 |
Identification of a SARS-CoV-2 Lineage B1.1.7 Virus in New York following Return Travel from the United Kingdom |
Leonardo C. Caserta, Patrick K. Mitchell, Elizabeth Plocharczyk, Diego G. Diel, John J. Dennehy |
| 78 |
[GO] |
2021―Feb―24 |
In-Frame 12-Nucleotide Deletion within Open Reading Frame 3a in a SARS-CoV-2 Strain Isolated from a Patient Hospitalized with COVID-19 |
John A. Lednicky, Kartikeya Cherabuddi, Massimiliano S. Tagliamonte, Maha A. Elbadry, Kuttichantran Subramaniam, Thomas B. Waltzek, J. Glenn Morris, John J. Dennehy |
| 79 |
[GO] |
2021―Feb―24 |
Genome Sequence of a SARS-CoV-2 Strain from Bangladesh That Is Nearly Identical to United Kingdom SARS-CoV-2 Variant B.1.1.7 |
Mohammad Enayet Hossain, M. Mahfuzur Rahman, M. Shaheen Alam, Yeasir Karim, Ananya Ferdous Hoque, Sezanur Rahman, Mohammed Ziaur Rahman, Mustafizur Rahman, Simon Roux |
| 80 |
[GO] |
2021―Feb―10 |
Coding-Complete Genome Sequences of NITMA1086 and NITMA1139, Two SARS-CoV-2 Isolates from Belagavi District, Karnataka State, India, Harboring the D614G Mutation |
Ishwar Singh, Umashankar Vetrivel, D. R. Harish, Debprasad Chattophadhyay, John J. Dennehy |
| 81 |
[GO] |
2021―Jan―27 |
Genome Sequencing of a Novel Coronavirus SARS-CoV-2 Isolate from Iraq |
Nihad A. M. Al-Rashedi, Danilo Licastro, Sreejith Rajasekharan, Simeone Dal Monego, Alessandro Marcello, Murad G. Munahi, Basel Saber Odda, Yasir Adil Jabbar Alabdali, Laith A. H. ALObaidi, Ali Jasim, Ibrahem A. Abdulzahra, Karar Kadhim, Ali Awad, Mohamed Bachay, John J. Dennehy |
| 82 |
[GO] |
2021―Jan―27 |
Genome Sequences of 10 SARS-CoV-2 Viral Strains Obtained by Nanopore Sequencing of Nasopharyngeal Swabs in Malta |
Manuele Biazzo, Silvia Madeddu, Elfath Elnifro, Tessabella Sultana, Josie Muscat, Christian A. Scerri, Francesco Santoro, David Pinzauti, Simon Roux |
| 83 |
[GO] |
2021―Jan―20 |
Expression of Concern for Sah et al., “Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal” |
|
| 84 |
[GO] |
2021―Jan―19 |
Genomic Sequences and Analysis of Five SARS-CoV-2 Variants Obtained from Patients in Lambayeque, Peru |
Franklin Rómulo Aguilar-Gamboa, Luis Alberto Salcedo-Mejía, Luis Miguel Serquén-López, Marco Enrique Mechan-Llontop, Percy Omar Tullume-Vergara, Juan José Bonifacio-Briceño, Ramsés Salas-Asencios, Heber Silva Díaz, Juan P. Cárdenas, Simon Roux |
| 85 |
[GO] |
2021―Jan―06 |
Genome Sequences of Two GH Clade SARS-CoV-2 Strains Isolated from Patients with COVID-19 in South Korea |
Minwoo Kim, Youn-Jung Lee, Jae Sun Yoon, Jin Young Ahn, Jung Ho Kim, Jun Yong Choi, Jong-Won Oh, Simon Roux |
| 86 |
[GO] |
2021―Jan―06 |
Two SARS-CoV-2 Genome Sequences of Isolates from Rural U.S. Patients Harboring the D614G Mutation, Obtained Using Nanopore Sequencing |
Piroon Jenjaroenpun, Visanu Wanchai, Kikumi D. Ono-Moore, Jennifer Laudadio, Laura P. James, Sean H. Adams, Fred Prior, Intawat Nookaew, David W. Ussery, Thidathip Wongsurawat, Simon Roux |
| 87 |
[GO] |
2021―Jan―06 |
Mutation Profile of SARS-CoV-2 Genome Sequences Originating from Eight Israeli Patient Isolates |
Galia Zaide, Inbar Cohen-Gihon, Ofir Israeli, Dana Stein, Ohad Shifman, Shay Weiss, Irit Simon, Orly Laskar, Adi Beth-Din, Anat Zvi, John J. Dennehy |
| 88 |
[GO] |
2020―Okt―21 |
Coding-Complete Genome Sequences of 23 SARS-CoV-2 Samples from the Philippines |
John Mark Velasco, Piyawan Chinnawirotpisan, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, Maria Theresa Valderama, Paula Corazon Diones, Susie Leonardia, Maria Leanor Timbol, Fatima Claire Navarro, Vicente Villa, Henry Tabinas, Domingo Chua, Stefan Fernandez, Anthony Jones, Chonticha Klungthong, Simon Roux |
| 89 |
[GO] |
2020―Okt―07 |
Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19 |
Jason A. Rothman, Theresa B. Loveless, Madison L. Griffith, Joshua A. Steele, John F. Griffith, Katrine L. Whiteson, Simon Roux |
| 90 |
[GO] |
2020―Okt―07 |
Metagenome of a Bronchoalveolar Lavage Fluid Sample from a Confirmed COVID-19 Case in Quito, Ecuador, Obtained Using Oxford Nanopore MinION Technology |
Sully Márquez, Belén Prado-Vivar, Juan José Guadalupe, Bernardo Gutierrez, Mónica Becerra-Wong, Manuel Jibaja, Milton Tobar, Verónica Barragán, Patricio Rojas-Silva, Josefina Coloma, Gabriel Trueba, Michelle Grunauer, Paúl Cárdenas, Simon Roux |
| 91 |
[GO] |
2020―Sep―23 |
Whole-Genome Sequence of SARS-CoV-2 Isolate Siena-1/2020 |
Maria Grazia Cusi, David Pinzauti, Claudia Gandolfo, Gabriele Anichini, Gianni Pozzi, Francesco Santoro, Simon Roux |
| 92 |
[GO] |
2020―Sep―23 |
Coding-Complete Genome Sequences of Three SARS-CoV-2 Strains from Bangladesh |
Shahina Akter, Tanjina Akhtar Banu, Barna Goswami, Eshrar Osman, Mohammad Samir Uzzaman, M. Ahashan Habib, Iffat Jahan, Abu Sayeed Mohammad Mahmud, M. Murshed Hasan Sarker, M. Saddam Hossain, A. K. Mohammad Shamsuzzaman, Tasnim Nafisa, M. Maruf Ahmed Molla, Mahmuda Yeasmin, Asish Kumar Ghosh, Sheikh M. Selim Al Din, Utpal Chandra Ray, Salek Ahmed Sajib, Maqsud Hossain, M. Salim Khan, John J. Dennehy |
| 93 |
[GO] |
2020―Sep―14 |
Four SARS-CoV-2 Genome Sequences from Late April in Stockholm, Sweden, Reveal a Rare Mutation in the Spike Protein |
Tatiany Aparecida Teixeira Soratto, Hamid Darban, Annelie Bjerkner, Maarten Coorens, Jan Albert, Tobias Allander, Björn Andersson, Simon Roux |
| 94 |
[GO] |
2020―Aug―05 |
Genome Sequences of Six SARS-CoV-2 Strains Isolated in Morocco, Obtained Using Oxford Nanopore MinION Technology |
Meriem Laamarti, M. W. Chemao-Elfihri, Souad Kartti, Rokia Laamarti, Loubna Allam, Mouna Ouadghiri, Imane Smyej, Jalila Rahoui, Houda Benrahma, Idrissa Diawara, Tarek Alouane, Abdelomunim Essabbar, Samir Siah, Mohammed Karra, Naima El Hafidi, Rachid El Jaoudi, Laila Sbabou, Chakib Nejjari, Saaid Amzazi, Rachid Mentag, Lahcen Belyamani, Azeddine Ibrahimi, John J. Dennehy |
| 95 |
[GO] |
2020―Jul―29 |
Reports of Coding-Complete Genome Sequences of Five 2019 Novel Coronavirus (SARS-CoV-2) Strains Isolated in Bangladesh |
M. Imran Khan, Kazi Nadim Hasan, Abu Sufian, M. Bayejid Hosen, Mohammed Nafiz Imtiaz Polol, M. Abdul Khaleque, M. Mizanur Rahman, M. S. M. Chowdhury, Hasan Ul Haider, Mamudul Hasan Razu, Mala Khan, Mohammad Fazle Rabbi, Simon Roux |
| 96 |
[GO] |
2020―Jul―29 |
SARS-CoV-2 Genome Sequence from Morocco, Obtained Using Ion AmpliSeq Technology |
Farah Jouali, Nabila Marchoudi, Fatima Zahra El Ansari, Yassine Kasmi, Mohamed Chenaoui, Aissam El Aliani, Nawfel Azami, Salma Loukman, Moulay Mustapha Ennaji, Rachid Benhida, Jamal Fekkak, Simon Roux |
| 97 |
[GO] |
2020―Jul―29 |
Genome Sequences of SARS-CoV-2 Strains Detected in Hong Kong |
Chun Hang Au, Wai Sing Chan, Ho Yin Lam, Dona N. Ho, Simon Y. M. Lam, Jonpaul S. T. Zee, Tsun Leung Chan, Edmond S. K. Ma, John J. Dennehy |
| 98 |
[GO] |
2020―Jul―08 |
Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Early Manifestations of COVID-19 in Israel |
Inbar Cohen-Gihon, Ofir Israeli, Ohad Shifman, Dana Stein, Hagit Achdout, Shay Weiss, Michal Mandelboim, Oran Erster, Gili Regev-Yochay, Gad Segal, Shmuel Yitzhaki, Shmuel C. Shapira, Adi Beth-Din, Anat Zvi, John J. Dennehy |
| 99 |
[GO] |
2020―Jul―08 |
Coding-Complete Genome Sequence of SARS-CoV-2 Isolate from Bangladesh by Sanger Sequencing |
M. Moniruzzaman, Mohammad Uzzal Hossain, M. Nazrul Islam, M. Hadisur Rahman, Irfan Ahmed, Tahia Anan Rahman, Arittra Bhattacharjee, M. Ruhul Amin, Asif Rashed, Chaman Ara Keya, Keshob Chandra Das, M. Salimullah, John J. Dennehy |
| 100 |
[GO] |
2020―Jul―01 |
Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Causing a COVID-19 Case in Morocco |
Sanaâ Lemriss, Amal Souiri, Narjis Amar, Nabil Lemzaoui, Omar Mestoui, Mohamed Labioui, Nabil Ouaariba, Ayoub Jibjibe, Mahmoud Yartaoui, Mohamed Chahmi, Marouane El Rhouila, Samiha Sellak, Nadia Kandoussi, Saâd El Kabbaj, Simon Roux |
| 101 |
[GO] |
2020―Jul―01 |
Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained from a South African Patient with Coronavirus Disease 2019 |
Mushal Allam, Arshad Ismail, Zamantungwa T. H. Khumalo, Stanford Kwenda, Peter van Heusden, Ruben Cloete, Constantinos Kurt Wibmer, Phillip Senzo Mtshali, Florah Mnyameni, Thabo Mohale, Kathleen Subramoney, Sibongile Walaza, Wendy Ngubane, Nevashan Govender, Nkengafac V. Motaze, Jinal N. Bhiman, Simon Roux |
| 102 |
[GO] |
2020―Jun―24 |
Genome Sequence of SARS-CoV-2 Isolate Cali-01, from Colombia, Obtained Using Oxford Nanopore MinION Sequencing |
Diana Lopez-Alvarez, Beatriz Parra, Wilmer J. Cuellar, John J. Dennehy |
| 103 |
[GO] |
2020―Jun―10 |
Complete Genome Sequence of a Novel Coronavirus (SARS-CoV-2) Isolate from Bangladesh |
Senjuti Saha, Roly Malaker, Mohammad Saiful Islam Sajib, Md Hasanuzzaman, Hafizur Rahman, Zabed B. Ahmed, Mohammad Shahidul Islam, Maksuda Islam, Yogesh Hooda, Vida Ahyong, Manu Vanaerschot, Joshua Batson, Samantha Hao, Jack Kamm, Amy Kistler, Cristina M. Tato, Joseph L. DeRisi, Samir K. Saha, Simon Roux |
| 104 |
[GO] |
2020―Jun―03 |
Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Northern Germany |
Susanne Pfefferle, Jiabin Huang, Dominik Nörz, Daniela Indenbirken, Marc Lütgehetmann, Lisa Oestereich, Thomas Günther, Adam Grundhoff, Martin Aepfelbacher, Nicole Fischer, John J. Dennehy |
| 105 |
[GO] |
2020―Mai―27 |
Complete Genome Sequence of SARS-CoV-2 in a Tiger from a U.S. Zoological Collection |
Leyi Wang, Patrick K. Mitchell, Paul P. Calle, Susan L. Bartlett, Denise McAloose, Mary Lea Killian, Fangfeng Yuan, Ying Fang, Laura B. Goodman, Richard Fredrickson, François Elvinger, Karen Terio, Kerrie Franzen, Tod Stuber, Diego G. Diel, Mia Kim Torchetti, Simon Roux |
| 106 |
[GO] |
2020―Mai―27 |
Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Egypt |
Ahmed Kandeil, Ahmed Mostafa, Rabeh El-Shesheny, Mahmoud Shehata, Wael H. Roshdy, Shymaa Showky Ahmed, Mokhtar Gomaa, Ahmed El Taweel, Ahmed E. Kayed, Sara H. Mahmoud, Yassmin Moatasim, Omnia Kutkat, Mina Nabil Kamel, Noura Mahrous, Mohamed El Sayes, Nancy M. El Guindy, Amal Naguib, Mohamed A. Ali, John J. Dennehy |
| 107 |
[GO] |
2020―Mai―13 |
Complete Genome Sequences of SARS-CoV-2 Strains Detected in Malaysia |
Yoong Min Chong, I-Ching Sam, Sasheela Ponnampalavanar, Sharifah Faridah Syed Omar, Adeeba Kamarulzaman, Vijayan Munusamy, Chee Kuan Wong, Fadhil Hadi Jamaluddin, Han Ming Gan, Jennifer Chong, Cindy Shuan Ju Teh, Yoke Fun Chan, Simon Roux |
| 108 |
[GO] |
2020―Mai―06 |
Near-Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Causing a COVID-19 Case in Peru |
Carlos Padilla-Rojas, Priscila Lope-Pari, Karolyn Vega-Chozo, Johanna Balbuena-Torres, Omar Caceres-Rey, Henri Bailon-Calderon, Maribel Huaringa-Nuñez, Nancy Rojas-Serrano, Simon Roux |
| 109 |
[GO] |
2020―Mrz―11 |
Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal |
Ranjit Sah, Alfonso J. Rodriguez-Morales, Runa Jha, Daniel K. W. Chu, Haogao Gu, Malik Peiris, Anup Bastola, Bibek Kumar Lal, Hemant Chanda Ojha, Ali A. Rabaan, Lysien I. Zambrano, Anthony Costello, Kouichi Morita, Basu Dev Pandey, Leo L. M. Poon, Simon Roux |
| 110 |
[GO] |
2020―Feb―26 |
Complete Genome Sequence of Avian Coronavirus Strain GA08 (GI-27 Lineage) |
Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Simon Roux |
| 111 |
[GO] |
2020―Feb―26 |
A 25-Year-Old Sample Contributes the Complete Genome Sequence of Avian Coronavirus Vaccine Strain ArkDPI, Reisolated from Commercial Broilers in the United States |
Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Simon Roux |
| 112 |
[GO] |
2020―Feb―19 |
Complete Genome Sequences of Five Human Coronavirus NL63 Strains Causing Respiratory Illness in Hospitalized Children in China |
Lu Zhang, Mian Gan, Zhaoyong Zhang, Xin Li, Wenkuan Liu, Airu Zhu, Jing Sun, Fang Li, Yanqun Wang, Fuchun Zhang, Jingxian Zhao, Rong Zhou, Jincun Zhao, Simon Roux |
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