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COVID answers in Scientific Journals all over the world


112 Results       Page 1

 [1] 
American Society for Microbiology: Microbiology Resource Announcements
  original article Date Title Authors   All Authors
1 [GO] 2025―Jan―08 Two coding-complete genomes of porcine reproductive and respiratory syndrome virus 2 (PRRSV-2) from field clinical samples in the Philippines Andrew Montecillo, Jimwel Bryan Christopher Ferrer, Zyne Baybay, Ruffa Maze Balmes, Roselle Falconite-Cudal, Mary Grace Alba, et al. (+6)
2 [GO] 2024―Nov―12 Genomic surveillance of SARS-CoV-2 in Nepal Binod Khadka, Rajindra Napit, Kathie A. Mihindukulasuriya, Smita Shrestha, Ramanuj Rauniyar, Eans T. Tuladhar, et al. (+11)
3 [GO] 2024―Jun―07 Setu: a pipeline for the robust assembly of SARS-CoV-2 genomes Nityendra Shukla, Neha Srivastava, Prachi Srivastava, Jitendra Narayan, Simon Roux
4 [GO] 2024―Apr―24 Coding-complete genomes of 18 SARS-CoV-2 Omicron JN.1, JN.1.4, and JN.1.11 sub-lineages in Bangladesh Anika Tahsin, Mahin Hasan, Saikt Rahman, Mohammad Jubair, Mokibul Hassan Afrad, Manjur Hossain Khan, et al. (+13)
5 [GO] 2024―Apr―23 Emergence of SARS-CoV-2 Omicron sub-lineage JN.1 in Bangladesh Manjur Hossain Khan Jony, Ahmed Nawsher Alam, Md. Abdullah Omar Nasif, Sharmin Sultana, Rubaid Anwar, Mithun Rudra, et al. (+5)
6 [GO] 2024―Mar―25 Coding-complete genomic sequence of a rhinovirus C-32 in a human nasal swab sample that tested false positive in a SARS-CoV-2 antigen test Tracey L. Moquin, Kuttichantran Subramaniam, John A. Lednicky, John J. Dennehy
7 [GO] 2024―Mar―19 Genome sequencing of severe acute respiratory syndrome COVID-19 EF.1 variant strain obtained from a Moroccan patient Lahcen Ouchari, Mouhssine Hemlali, Hamza Ghammaz, Taha Chouati, Marouane Melloul, Sanaâ Alaoui Amine, et al. (+6)
8 [GO] 2024―Feb―27 Whole-genome sequencing of SARS-CoV-2 from the initial cases of domestic cat infections in Canada Asma Sultana, Dorothee Bienzle, Scott Weese, Brad Pickering, Peter Kruczkiewicz, Greg Smith, et al. (+3)
9 [GO] 2023―Sep―05 Coding-complete genomes of XBB.1.16, XBB.2.3, FL.4 (alias of XBB.1.9.1.4), and XBB.3 of SARS-CoV-2 Omicron isolated from Bangladesh Saikt Rahman, Mohammad Tanbir Habib, Mokibul Hassan Afrad, Mahin Hasan, Anika Tahsin, Mohammad Jubair, et al. (+8)
10 [GO] 2023―Jun―13 Complete Coding Sequence of a Lineage AY.122 SARS-CoV-2 Virus Strain Detected in Kazakhstan Bekbolat Usserbayev, Yergali Abduraimov, Nurlan Kozhabergenov, Aibarys Melisbek, Meirzhan Shirinbekov, Manar Smagul, et al. (+4)
11 [GO] 2023―May―24 Coding-Complete Genome Sequences of an Omicron Subvariant (BA.5.2.20) of SARS-CoV-2 Zineb Rhazzar, Mouhssine Hemlali, Marouane Melloul, Maha Ouarab, Omar Nyabi, Mostafa Elouennass, et al. (+5)
12 [GO] 2023―May―03 Complete Genome Sequence of a Bovine Coronavirus Isolated from a Goat in Pennsylvania, USA Shubhada K. Chothe, Maurice Byukusenge, Manoj K. Sekhwal, Lingling Li, Lindsey Cecelia LaBella, Padmaja Jakka, et al. (+9)
13 [GO] 2023―May―01 Erratum for Rondeau et al., “Accessible and Validated Processing of SARS-CoV-2 from Wastewater” Nicole C. Rondeau, Oliver J. Rose, Lina A. Ariyan, Brian J. Mailloux, JJ L. Miranda
14 [GO] 2023―Feb―13 Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced Lori Wong, Christopher Randolph, Emily Kanwischer, Ashton Ingold, Bobby L. Boyanton, Jay Taylor, et al. (+12)
15 [GO] 2023―Feb―13 Coding-Complete Genome Sequences of 40 SARS-CoV-2 Omicron XBB, XBB.1, and XBB.2 Sublineage Strains in Bangladesh Mohammad Tanbir Habib, Mokibul Hassan Afrad, Saikt Rahman, Manjur Hossain Khan, Mohammad Moajjam Hossain, Farhana Khanam, et al. (+4)
16 [GO] 2022―Dec―12 Genome Sequences of SARS-CoV-2 Strains from the Republic of Moldova Mariana Ulinici, Martín Soñora, Emanuele Orsini, Danilo Licastro, Simeone Dal Monego, Mihail Todiras, et al. (+4)
17 [GO] 2022―Dec―06 Genome Sequences of 23 SARS-CoV-2 Omicron-Lineage Strains from Bangladesh Mohabbat Hossain, Omar Hamza Bin Manjur, Lincon Hasda, Mohammad Tanbir Habib, Mokibul Hassan Afrad, Manjur Hossain Khan, et al. (+12)
18 [GO] 2022―Nov―30 Genome Sequence of a Recombinant SARS-CoV-2 Lineage XAM (BA.1.1/BA.2.9) Strain from a Clinical Sample in Santo Domingo, Dominican Republic Robert Paulino-Ramírez, Kien Pham, Mallery I. Breban, Armando Peguero, Maridania Jabier, Nelissa Sánchez, et al. (+5)
19 [GO] 2022―Nov―14 Coding Complete Genome Sequence of the SARS-CoV-2 Virus Strain, Variant B.1.1, Sampled from Kazakhstan Yerbol Burashev, Bekbolat Usserbayev, Lespek Kutumbetov, Yergali Abduraimov, Markhabat Kassenov, Aslan Kerimbayev, et al. (+6)
20 [GO] 2022―Oct―19 Genome Sequence of Bovine Coronavirus Variants from the Nasal Virome of Irish Beef Suckler and Pre-weaned Dairy Calves Clinically Diagnosed with Bovine Respiratory Disease Kerrie Ní Dhufaigh, Matthew McCabe, Paul Cormican, Inmaculada Cuevas-Gomez, Mark McGee, Tara McDaneld, et al. (+2)
21 [GO] 2022―Oct―17 Genome Sequence of an Early Imported Case of SARS-CoV-2 Delta Variant (B.1.617.2 AY.122) in Iraq in April 2021 Nihad A. M. Al-Rashedi, Hussein Alburkat, Murad G. Munahi, Ali H. Jasim, Batool Kadham Salman, Basel Saber Oda, et al. (+6)
22 [GO] 2022―Aug―23 Near-Complete Genome Sequence of a SARS-CoV-2 Variant B.1.1.7 Virus Strain Isolated in Kazakhstan Bekbolat Usserbayev, Kunsulu Zakarya, Lespek Kutumbetov, Mukhit Orynbaуev, Kulyaisan Sultankulova, Yergali Abduraimov, et al. (+9)
23 [GO] 2022―Aug―16 Complete Genome Sequence of an Italian Swine Enteric Coronavirus Strain 77590/2019 Alice Papetti, Paolo Bonilauri, Chiara Chiapponi, Laura Baioni, Maria Beatrice Boniotti, Simon Roux
24 [GO] 2022―Jul―19 Near-Full-Length Genome Sequences Representing an Event of Zooanthroponotic Transmission of SARS-CoV-2 Lineage B.1.189 in Mexico during 2020 Roberto Navarro-Lopez, Mario Solis-Hernandez, Marisol K. Rocha-Martinez, Samantha Eberl, Ninnet Gomez-Romero, Lauro Velazquez-Salinas, et al. (+2)
25 [GO] 2022―Jul―11 Co-circulation of Multiple SARS-CoV-2 Variants of Concern in Dhaka, Bangladesh, during the Second Wave of the COVID-19 Pandemic M. Abdullah Omar Nasif, Nahida Sultana, Raad Rahmat, Tahmina Akther, Afzalun Nessa, Munira Jahan, Simon Roux
26 [GO] 2022―Jun―08 Gut Microbiome 16S rRNA Gene Amplicon Taxonomic Profiling of Hospitalized Moroccan COVID-19 Patients Sofia Sehli, Abdellah Idrissi Azami, Nouzha Dini, Nihal Habib, Bouchra Chaouni, Salsabil Hamdi, et al. (+6)
27 [GO] 2022―May―31 Genome Sequencing of Omicron Variants of SARS-CoV-2 Circulating in Bangladesh during the Third Wave of the COVID-19 Pandemic Munira Jahan, M. Abdullah Omar Nasif, Raad Rahmat, SM Rashed Ul Islam, Saif Ullah Munshi, M. Sharfuddin Ahmed, Simon Roux
28 [GO] 2022―May―31 Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern Opeyemi U. Lawal, Linkang Zhang, Valeria R. Parreira, R. Stephen Brown, Charles Chettleburgh, Nora Dannah, et al. (+16)
29 [GO] 2022―Apr―14 Coding-Complete Sequence of a SARS-CoV-2 Strain from an Omicron (B.1.1.529+BA.1) Variant Detected in Morocco Taha Chouati, Mouhssine Hemlali, Marouane Melloul, Sanaa Alaoui-Amine, Safae Rhoulam, Hamza Ghamaz, et al. (+11)
30 [GO] 2022―Apr―13 Report of SARS-CoV-2 BA.1 Lineage in Morocco Safae El Mazouri, Houda Bendani, Nasma Boumajdi, Mhammed Chaoui Roqai, Tarik Aanniz, Myriam Seffar, et al. (+8)
31 [GO] 2022―Mar―28 Genome Sequences of 408 SARS-CoV-2 Strains Obtained from Nasopharyngeal Swabs in La Araucanía Region, Southern Chile Michel Abanto Marin, Benjamín Leyton-Carcaman, Claudio Vázquez, Benjamín Durán-Vinet, Katterin Bobadilla, Claudio Rodriguez-Ruiz, et al. (+9)
32 [GO] 2022―Mar―24 Genome Sequences of 25 SARS-CoV-2 Sublineage B.1.1.529 Omicron Strains in Bangladesh Omar Hamza Bin Manjur, Mokibul Hassan Afrad, Manjur Hossain Khan, Mohabbat Hossain, Zannat Kawser, Ahmed Nawsher Alam, et al. (+16)
33 [GO] 2022―Feb―03 Coding-Complete Genome Sequences of a Delta Subvariant (AY.33) of SARS-CoV-2 Obtained from Moroccan COVID-19 Patients Mouhssine Hemlali, Taha Chouati, Hamza Ghammaz, Marouane Melloul, Sanaâ Alaoui Amine, Safaa Rhoulam, et al. (+7)
34 [GO] 2022―Feb―03 SARS-CoV-2 Genome Sequence Obtained from Ethiopia Molalegne Bitew, Getnet Hailu, Yakob Gebregziabher Tsegay, Keyru Tuki, Kominist Asmamaw, Kassahun Tesfaye, et al. (+6)
35 [GO] 2022―Feb―03 Identification of the First SARS-CoV-2 Lineage B.1.1.529 Virus Detected in Europe Bert Vanmechelen, Anne-Sophie Logist, Tony Wawina-Bokalanga, Jens Verlinden, Joan Martí-Carreras, Caspar Geenen, et al. (+6)
36 [GO] 2022―Jan―27 Genome Sequencing of Wastewater Confirms the Arrival of the SARS-CoV-2 Omicron Variant at Frankfurt Airport but Limited Spread in the City of Frankfurt, Germany, in November 2021 Shelesh Agrawal, Laura Orschler, Simona Tavazzi, Robert Greither, Bernd Manfred Gawlik, Susanne Lackner, Simon Roux
37 [GO] 2022―Jan―27 Whole-Genome Sequencing of SARS-CoV-2 Strains from Asymptomatic Individuals in India Ambica Rangaiah, Sathyanarayan Muthur Shankar, Shashiraja Padukone, Kusuma Gowdra Rangappa, Shantala Gowdara Basawarajappa, Jelle Matthijnssens
38 [GO] 2021―Dec―09 SARS-CoV-2 Genome Sequences, Including One with an ORF7a Deletion, Obtained from Patients in Bangladesh Mizanur Rahman, Rummana Rahim, Abu Hasan, Naoko Kawai, Lavel Chinyama Moonga, Tatsuki Sugi, et al. (+3)
39 [GO] 2021―Dec―02 Genome Sequencing of the SARS-CoV-2 Delta (B.1.617.2) Variant of Concern Detected in Bangladesh Tanjina Akhtar Banu, M. Murshed Hasan Sarkar, Shahina Akter, Barna Goswami, Iffat Jahan, Eshrar Osman, et al. (+10)
40 [GO] 2021―Dec―02 Coding-Complete Genome Sequences of Alpha and Delta SARS-CoV-2 Variants from Kamphaeng Phet Province, Thailand, from May to July 2021 Kanyarat Phutthasophit, Darunee Buddhari, Piyawan Chinnawirotpisan, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, et al. (+9)
41 [GO] 2021―Nov―24 Whole-Genome Sequences of SARS-CoV-2 Isolates from the Dominican Republic R. Paulino-Ramirez, E. Riego, A. Vallejo-Degaudenzi, V. V. Calderon, L. Tapia, Patricia León, et al. (+6)
42 [GO] 2021―Nov―24 Coding-Complete Genome Sequence of a SARS-CoV-2 Variant Obtained from Raw Sewage at the University of Tennessee-Knoxville Campus K. T. Ash, I. Alamilla, Y. Li, D. C. Joyner, D. E. Williams, P. J. McKay, et al. (+7)
43 [GO] 2021―Oct―21 Complete Genome Sequence of Bovine Coronavirus in Blood Diarrhea from Adult Cattle That Died from Winter Dysentery in Japan Keisuke Nakagawa, Hitomi Kumano, Yuko Kitamura, Keisuke Kuwata, Eiji Tanaka, Hideto Fukushi, Jelle Matthijnssens
44 [GO] 2021―Oct―21 Genome Sequences of SARS-CoV-2 Sublineage B.1.617.2 Strains from 12 Children in Chattogram, Bangladesh Adnan Mannan, H. M. Hamidullah Mehedi, M. Abdur Rob, Sanjoy Kanti Biswas, Nahid Sultana, Rajdeep Biswas, et al. (+14)
45 [GO] 2021―Oct―07 Genome Sequences of Community SARS-CoV-2 B.1.526 and P.1 Variants Circulating in the Dominican Republic Robert Paulino-Ramirez, Victor Virgilio Calderon, Alejandro Vallejo Degaudenzi, Simon Roux
46 [GO] 2021―Sep―23 Whole-Genome Sequences of SARS-CoV-2 Isolates from Ethiopian Patients Dawit Hailu Alemayehu, Bethlehem Adnew, Fekadu Alemu, Dessalegn Abeje Tefera, Tamrayehu Seyoum, Getachew Tesfaye Beyene, et al. (+8)
47 [GO] 2021―Sep―16 Draft Genome Sequence of a Multidrug-Resistant Escherichia coli Sequence Type 1193 Pandemic Clone Isolated from Wastewater in Austria Adriana Cabal, Nadine Peischl, Gerhard Rab, Anna Stöger, Burkhard Springer, Jasmin Sucher, et al. (+3)
48 [GO] 2021―Sep―02 Coding-Complete Sequence of a SARS-CoV-2 B.1.1.25 Lineage Obtained from an 8-Day-Old Deceased Neonate Muntasir Alam, M. Ishrat Jahan, Shafina Jahan, Dianna M. Blau, Afruna Rahman, Mohammed Ziaur Rahman, et al. (+5)
49 [GO] 2021―Aug―19 Phylogenetically Distinct Near-Complete Genome Sequences of Porcine Reproductive and Respiratory Syndrome Virus Type 2 Variants from Four Distinct Disease Outbreaks at U.S. Swine Farms over the Past 6 Years Declan C. Schroeder, Nkechi M. Odogwu, Jessica Kevill, My Yang, Venkatramana D. Krishna, Mariana Kikuti, et al. (+16)
50 [GO] 2021―Aug―05 Whole-Genome Sequences of SARS-CoV-2 Lineage B.1.525 Strains (Variant η) Detected from Patients in the Abruzzo Region (Central Italy) during Spring 2021 Emiliano Delli Compagni, Iolanda Mangone, Barbara Bonfini, Annapia Di Gennaro, Liana Teodori, Alessandra Leone, et al. (+10)
51 [GO] 2021―Aug―05 Near-Complete Genome Sequences of Nine SARS-CoV-2 Strains Harboring the D614G Mutation in Malaysia Ummu Afeera Zainulabid, Norhidayah Kamarudin, Ahmad Hafiz Zulkifly, Han Ming Gan, Darren Dean Tay, Shing Wei Siew, et al. (+7)
52 [GO] 2021―Jul―22 Genomic Surveillance of SARS-CoV-2 Viruses Collected during the Ending Phase of the First Wave of the COVID-19 Pandemic in Bangladesh Munira Jahan, Arittra Bhattacharjee, Raad Rahmat, S. M. Rashedul Islam, Tahmina Akhter, Ishtiaque Ahammad, et al. (+4)
53 [GO] 2021―Jul―15 Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines John Mark Velasco, Piyawan Chinnawirotpisan, Maria Theresa Valderama, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, et al. (+9)
54 [GO] 2021―Jul―15 Genome Sequences of 15 SARS-CoV-2 Sublineage B.1.617.2 Strains in Bangladesh Mokibul Hassan Afrad, Manjur Hossain Khan, Sadia Isfat Ara Rahman, Omar Hamza Bin Manjur, Mohabbat Hossain, Ahmed Nawsher Alam, et al. (+7)
55 [GO] 2021―Jul―08 Genome Sequences of Two Novel Coronavirus (SARS-CoV-2) Isolates from Dhaka, Bangladesh M. Abdul Matin, Abdullah Al Nahid, Bishajit Sarkar, M. Asad Ullah, Yusha Araf, Nihad Adnan, et al. (+3)
56 [GO] 2021―Jul―08 Genome Sequence of a SARS-CoV-2 P.1 Variant of Concern (20J/501Y.V3) from Bangladesh M. Murshed Hasan Sarkar, Mohammad Fazle Alam Rabbi, Shahina Akter, Tanjina Akhtar Banu, Barna Goswami, Iffat Jahan, et al. (+12)
57 [GO] 2021―Jul―01 New SARS-CoV-2 Variant from Jordan Lo’ai Alanagreh, Mustafa Ababneh, Abdel-Ellah Al-Shudifat, Mai Ajlouny, Hanan Abu-Shaikh, Foad Alzoughool, et al. (+4)
58 [GO] 2021―Jun―11 Accessible and Validated Processing of SARS-CoV-2 from Wastewater Nicole C. Rondeau, Oliver J. Rose, Lina A. Ariyan, Brian J. Mailloux, JJ L. Miranda, Irene L. G. Newton
59 [GO] 2021―Jun―11 Genome Sequences of SARS-CoV-2 P.1 (Variant of Concern) and P.2 (Variant of Interest) Identified in Uruguay Yanina Panzera, Natalia Goñi, Lucía Calleros, Natalia Ramos, Sandra Frabasile, Ana Marandino, et al. (+15)
60 [GO] 2021―Jun―11 Complete Coding Genome Sequence of a Novel Porcine Reproductive and Respiratory Syndrome Virus 2 Restriction Fragment Length Polymorphism 1-4-4 Lineage 1C Variant Identified in Iowa, USA Giovani Trevisan, Ganwu Li, Cesar A. A. Moura, Katie Coleman, Pete Thomas, Jianqiang Zhang, et al. (+4)
61 [GO] 2021―Jun―09 Metatranscriptomic Analysis Reveals SARS-CoV-2 Mutations in Wastewater of the Frankfurt Metropolitan Area in Southern Germany Shelesh Agrawal, Laura Orschler, Susanne Lackner, Simon Roux
62 [GO] 2021―May―30 Genome Sequencing Identified a SARS-CoV-2 Lineage B.1.1.7 Strain with a High Number of Mutations from Dhaka, Bangladesh Razib Mazumder, Ahmed Abdullah, Mohammad Enayet Hossain, M. Mahfuzur Rahman, Omar Hamza Bin Manjur, Mustafizur Rahman, et al. (+2)
63 [GO] 2021―May―28 Genome Sequence of a SARS-CoV-2 VUI 202012/01 Strain Identified from a Patient Returning from London, England, to the Apulia Region of Italy Daniela Loconsole, Anna Sallustio, Marisa Accogli, Francesca Centrone, Loredana Capozzi, Laura Del Sambro, et al. (+3)
64 [GO] 2021―May―19 Complete Genome Sequence of a SARS-CoV-2 Strain Sampled in Morocco in May 2020, Obtained Using Sanger Sequencing Abderrazak Rfaki, Nadia Touil, Mouhssine Hemlali, Sanaâ Alaoui Amine, Marouane Melloul, Moulay Abdelaziz El Alaoui, et al. (+6)
65 [GO] 2021―May―05 Detection and Genome Sequencing of SARS-CoV-2 Variants Belonging to the B.1.1.7 Lineage in the Philippines Francis A. Tablizo, Cynthia P. Saloma, Marc Jerrone R. Castro, Kenneth M. Kim, Maria Sofia L. Yangzon, Carlo M. Lapid, et al. (+27)
66 [GO] 2021―Apr―21 Report of SARS-CoV-2 B1.1.7 Lineage in Morocco Mouna Ouadghiri, Tarik Aanniz, Abdelomunim Essabbar, Myriam Seffar, Hakima Kabbaj, Ghizlane El Amin, et al. (+5)
67 [GO] 2021―Apr―14 Whole-Genome Sequence of Avian coronavirus from a 15-Year-Old Sample Confirms Evidence of GA08-like Strain Circulation 4 Years Prior to Its First Reported Outbreak Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Jelle Matthijnssens
68 [GO] 2021―Apr―14 Genome Sequences of Three SARS-CoV-2 ORF7a Deletion Variants Obtained from Patients in Hong Kong Herman Tse, Sally Cheuk-Ying Wong, Ka-Fai Ip, Vincent Chi-Chung Cheng, Kelvin Kai-Wang To, David Christopher Lung, et al. (+2)
69 [GO] 2021―Apr―14 Genome Sequences of Five SARS-CoV-2 Variants from Mumbai, India, Obtained by Nanopore Sequencing Kayzad Nilgiriwala, Ayan Mandal, Grishma Patel, Tejal Mestry, Smriti Vaswani, Ambreen Shaikh, et al. (+7)
70 [GO] 2021―Mar―31 Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh M. Imranul Hoq, Robiul Hasan Bhuiyan, M. Khondakar Raziur Rahman, Imam Hossen, Sajib Rudra, M. Arif Hossain, et al. (+5)
71 [GO] 2021―Mar―31 Coding-Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Gilgit, Pakistan Aneela Javed, Saifullah Khan Niazi, Eijaz Ghani, Maham Yamin, Muhammad Saqib, Hussnain A. Janjua, et al. (+2)
72 [GO] 2021―Mar―24 Genome Sequences of Three SARS-CoV-2 P.1 Strains Identified from Patients Returning from Brazil to Italy Emiliano Delli Compagni, Lucija Jurisic, Marialuigia Caporale, Federico Bacà, Silvia Scialabba, Sara Fanì, et al. (+19)
73 [GO] 2021―Mar―24 Near-Complete Genome Sequence of a SARS-CoV-2 VOC 202012/01 Strain in Peru C. Padilla-Rojas, L. Barcena-Flores, K. Vega-Chozo, M. Galarza-Perez, H. Bailon-Calderon, P. Lope-Pari, et al. (+5)
74 [GO] 2021―Mar―17 First Report of a SARS-CoV-2 Genome Sequence with a Spike His69-Val70 Deletion and an Asn439Lys Mutation in Morocco Tarik Aanniz, Mouna Ouadghiri, Mohammed Amine Bendahou, Mohammed Walid Chemao-Elfihri, Mohamed Chenaoui, Hanae Dakka, et al. (+8)
75 [GO] 2021―Mar―10 Coding-Complete Genome Sequences and Mutation Profiles of Nine SARS-CoV-2 Strains Detected from COVID-19 Patients in Bangladesh Nihad Adnan, Mohib Ullah Khondoker, M. Shaminur Rahman, M. Firoz Ahmed, Shahana Sharmin, Nadim Sharif, et al. (+15)
76 [GO] 2021―Mar―10 Coding-Complete Genome Sequence and Phylogenetic Relatedness of a SARS-CoV-2 Strain Detected in March 2020 in Cameroon Richard Njouom, Serge Alain Sadeuh-Mba, Jules Tchatchueng, Moussa Moïse Diagne, Ndongo Dia, Paul Alain Ngoupo Tagnouokam, et al. (+10)
77 [GO] 2021―Mar―03 Identification of a SARS-CoV-2 Lineage B1.1.7 Virus in New York following Return Travel from the United Kingdom Leonardo C. Caserta, Patrick K. Mitchell, Elizabeth Plocharczyk, Diego G. Diel, John J. Dennehy
78 [GO] 2021―Feb―24 In-Frame 12-Nucleotide Deletion within Open Reading Frame 3a in a SARS-CoV-2 Strain Isolated from a Patient Hospitalized with COVID-19 John A. Lednicky, Kartikeya Cherabuddi, Massimiliano S. Tagliamonte, Maha A. Elbadry, Kuttichantran Subramaniam, Thomas B. Waltzek, et al. (+2)
79 [GO] 2021―Feb―24 Genome Sequence of a SARS-CoV-2 Strain from Bangladesh That Is Nearly Identical to United Kingdom SARS-CoV-2 Variant B.1.1.7 Mohammad Enayet Hossain, M. Mahfuzur Rahman, M. Shaheen Alam, Yeasir Karim, Ananya Ferdous Hoque, Sezanur Rahman, et al. (+3)
80 [GO] 2021―Feb―10 Coding-Complete Genome Sequences of NITMA1086 and NITMA1139, Two SARS-CoV-2 Isolates from Belagavi District, Karnataka State, India, Harboring the D614G Mutation Ishwar Singh, Umashankar Vetrivel, D. R. Harish, Debprasad Chattophadhyay, John J. Dennehy
81 [GO] 2021―Jan―27 Genome Sequencing of a Novel Coronavirus SARS-CoV-2 Isolate from Iraq Nihad A. M. Al-Rashedi, Danilo Licastro, Sreejith Rajasekharan, Simeone Dal Monego, Alessandro Marcello, Murad G. Munahi, et al. (+9)
82 [GO] 2021―Jan―27 Genome Sequences of 10 SARS-CoV-2 Viral Strains Obtained by Nanopore Sequencing of Nasopharyngeal Swabs in Malta Manuele Biazzo, Silvia Madeddu, Elfath Elnifro, Tessabella Sultana, Josie Muscat, Christian A. Scerri, et al. (+3)
83 [GO] 2021―Jan―20 Expression of Concern for Sah et al., “Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal”
84 [GO] 2021―Jan―19 Genomic Sequences and Analysis of Five SARS-CoV-2 Variants Obtained from Patients in Lambayeque, Peru Franklin Rómulo Aguilar-Gamboa, Luis Alberto Salcedo-Mejía, Luis Miguel Serquén-López, Marco Enrique Mechan-Llontop, Percy Omar Tullume-Vergara, Juan José Bonifacio-Briceño, et al. (+4)
85 [GO] 2021―Jan―06 Genome Sequences of Two GH Clade SARS-CoV-2 Strains Isolated from Patients with COVID-19 in South Korea Minwoo Kim, Youn-Jung Lee, Jae Sun Yoon, Jin Young Ahn, Jung Ho Kim, Jun Yong Choi, et al. (+2)
86 [GO] 2021―Jan―06 Two SARS-CoV-2 Genome Sequences of Isolates from Rural U.S. Patients Harboring the D614G Mutation, Obtained Using Nanopore Sequencing Piroon Jenjaroenpun, Visanu Wanchai, Kikumi D. Ono-Moore, Jennifer Laudadio, Laura P. James, Sean H. Adams, et al. (+5)
87 [GO] 2021―Jan―06 Mutation Profile of SARS-CoV-2 Genome Sequences Originating from Eight Israeli Patient Isolates Galia Zaide, Inbar Cohen-Gihon, Ofir Israeli, Dana Stein, Ohad Shifman, Shay Weiss, et al. (+5)
88 [GO] 2020―Oct―21 Coding-Complete Genome Sequences of 23 SARS-CoV-2 Samples from the Philippines John Mark Velasco, Piyawan Chinnawirotpisan, Khajohn Joonlasak, Wudtichai Manasatienkij, Angkana Huang, Maria Theresa Valderama, et al. (+11)
89 [GO] 2020―Oct―07 Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19 Jason A. Rothman, Theresa B. Loveless, Madison L. Griffith, Joshua A. Steele, John F. Griffith, Katrine L. Whiteson, Simon Roux
90 [GO] 2020―Oct―07 Metagenome of a Bronchoalveolar Lavage Fluid Sample from a Confirmed COVID-19 Case in Quito, Ecuador, Obtained Using Oxford Nanopore MinION Technology Sully Márquez, Belén Prado-Vivar, Juan José Guadalupe, Bernardo Gutierrez, Mónica Becerra-Wong, Manuel Jibaja, et al. (+8)
91 [GO] 2020―Sep―23 Whole-Genome Sequence of SARS-CoV-2 Isolate Siena-1/2020 Maria Grazia Cusi, David Pinzauti, Claudia Gandolfo, Gabriele Anichini, Gianni Pozzi, Francesco Santoro, Simon Roux
92 [GO] 2020―Sep―23 Coding-Complete Genome Sequences of Three SARS-CoV-2 Strains from Bangladesh Shahina Akter, Tanjina Akhtar Banu, Barna Goswami, Eshrar Osman, Mohammad Samir Uzzaman, M. Ahashan Habib, et al. (+15)
93 [GO] 2020―Sep―14 Four SARS-CoV-2 Genome Sequences from Late April in Stockholm, Sweden, Reveal a Rare Mutation in the Spike Protein Tatiany Aparecida Teixeira Soratto, Hamid Darban, Annelie Bjerkner, Maarten Coorens, Jan Albert, Tobias Allander, et al. (+2)
94 [GO] 2020―Aug―05 Genome Sequences of Six SARS-CoV-2 Strains Isolated in Morocco, Obtained Using Oxford Nanopore MinION Technology Meriem Laamarti, M. W. Chemao-Elfihri, Souad Kartti, Rokia Laamarti, Loubna Allam, Mouna Ouadghiri, et al. (+17)
95 [GO] 2020―Jul―29 Reports of Coding-Complete Genome Sequences of Five 2019 Novel Coronavirus (SARS-CoV-2) Strains Isolated in Bangladesh M. Imran Khan, Kazi Nadim Hasan, Abu Sufian, M. Bayejid Hosen, Mohammed Nafiz Imtiaz Polol, M. Abdul Khaleque, et al. (+7)
96 [GO] 2020―Jul―29 SARS-CoV-2 Genome Sequence from Morocco, Obtained Using Ion AmpliSeq Technology Farah Jouali, Nabila Marchoudi, Fatima Zahra El Ansari, Yassine Kasmi, Mohamed Chenaoui, Aissam El Aliani, et al. (+6)
97 [GO] 2020―Jul―29 Genome Sequences of SARS-CoV-2 Strains Detected in Hong Kong Chun Hang Au, Wai Sing Chan, Ho Yin Lam, Dona N. Ho, Simon Y. M. Lam, Jonpaul S. T. Zee, et al. (+3)
98 [GO] 2020―Jul―08 Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Early Manifestations of COVID-19 in Israel Inbar Cohen-Gihon, Ofir Israeli, Ohad Shifman, Dana Stein, Hagit Achdout, Shay Weiss, et al. (+9)
99 [GO] 2020―Jul―08 Coding-Complete Genome Sequence of SARS-CoV-2 Isolate from Bangladesh by Sanger Sequencing M. Moniruzzaman, Mohammad Uzzal Hossain, M. Nazrul Islam, M. Hadisur Rahman, Irfan Ahmed, Tahia Anan Rahman, et al. (+7)
100 [GO] 2020―Jul―01 Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Causing a COVID-19 Case in Morocco Sanaâ Lemriss, Amal Souiri, Narjis Amar, Nabil Lemzaoui, Omar Mestoui, Mohamed Labioui, et al. (+9)
101 [GO] 2020―Jul―01 Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained from a South African Patient with Coronavirus Disease 2019 Mushal Allam, Arshad Ismail, Zamantungwa T. H. Khumalo, Stanford Kwenda, Peter van Heusden, Ruben Cloete, et al. (+11)
102 [GO] 2020―Jun―24 Genome Sequence of SARS-CoV-2 Isolate Cali-01, from Colombia, Obtained Using Oxford Nanopore MinION Sequencing Diana Lopez-Alvarez, Beatriz Parra, Wilmer J. Cuellar, John J. Dennehy
103 [GO] 2020―Jun―10 Complete Genome Sequence of a Novel Coronavirus (SARS-CoV-2) Isolate from Bangladesh Senjuti Saha, Roly Malaker, Mohammad Saiful Islam Sajib, Md Hasanuzzaman, Hafizur Rahman, Zabed B. Ahmed, et al. (+13)
104 [GO] 2020―Jun―03 Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Northern Germany Susanne Pfefferle, Jiabin Huang, Dominik Nörz, Daniela Indenbirken, Marc Lütgehetmann, Lisa Oestereich, et al. (+5)
105 [GO] 2020―May―27 Complete Genome Sequence of SARS-CoV-2 in a Tiger from a U.S. Zoological Collection Leyi Wang, Patrick K. Mitchell, Paul P. Calle, Susan L. Bartlett, Denise McAloose, Mary Lea Killian, et al. (+11)
106 [GO] 2020―May―27 Coding-Complete Genome Sequences of Two SARS-CoV-2 Isolates from Egypt Ahmed Kandeil, Ahmed Mostafa, Rabeh El-Shesheny, Mahmoud Shehata, Wael H. Roshdy, Shymaa Showky Ahmed, et al. (+13)
107 [GO] 2020―May―13 Complete Genome Sequences of SARS-CoV-2 Strains Detected in Malaysia Yoong Min Chong, I-Ching Sam, Sasheela Ponnampalavanar, Sharifah Faridah Syed Omar, Adeeba Kamarulzaman, Vijayan Munusamy, et al. (+7)
108 [GO] 2020―May―06 Near-Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Causing a COVID-19 Case in Peru Carlos Padilla-Rojas, Priscila Lope-Pari, Karolyn Vega-Chozo, Johanna Balbuena-Torres, Omar Caceres-Rey, Henri Bailon-Calderon, et al. (+3)
109 [GO] 2020―Mar―11 Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal Ranjit Sah, Alfonso J. Rodriguez-Morales, Runa Jha, Daniel K. W. Chu, Haogao Gu, Malik Peiris, et al. (+10)
110 [GO] 2020―Feb―26 Complete Genome Sequence of Avian Coronavirus Strain GA08 (GI-27 Lineage) Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Simon Roux
111 [GO] 2020―Feb―26 A 25-Year-Old Sample Contributes the Complete Genome Sequence of Avian Coronavirus Vaccine Strain ArkDPI, Reisolated from Commercial Broilers in the United States Iryna V. Goraichuk, James F. Davis, Arun B. Kulkarni, Claudio L. Afonso, David L. Suarez, Simon Roux
112 [GO] 2020―Feb―19 Complete Genome Sequences of Five Human Coronavirus NL63 Strains Causing Respiratory Illness in Hospitalized Children in China Lu Zhang, Mian Gan, Zhaoyong Zhang, Xin Li, Wenkuan Liu, Airu Zhu, et al. (+8)
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