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COVID answers in Scientific Journals all over the world

American Chemical Society: The Journal of Physical Chemistry B
  original article Date Title Authors   All Authors
1 [GO] 2021―Aug―09 Presence of a SARS-CoV-2 Protein Enhances Amyloid Formation of Serum Amyloid A Asis K. Jana, Augustus B. Greenwood, Ulrich H. E. Hansmann
2 [GO] 2021―Jul―30 Role of ATP in the RNA Translocation Mechanism of SARS-CoV-2 NSP13 Helicase Ryan Weber, Martin McCullagh
3 [GO] 2021―Jul―28 Accelerating COVID-19 Research Using Molecular Dynamics Simulation Aditya K. Padhi, Soumya Lipsa Rath, Timir Tripathi
4 [GO] 2021―Jul―23 Structural Decoding of a Small Molecular Inhibitor on the Binding of SARS-CoV-2 to the ACE 2 Receptor Pushpendra Mani Mishra, Chayan Kanti Nandi
5 [GO] 2021―Jul―13 Binding of SARS-CoV-2 Fusion Peptide to Host Endosome and Plasma Membrane Stefan L. Schaefer, Hendrik Jung, Gerhard Hummer
6 [GO] 2021―Jul―06 Electrostatic Interactions Explain the Higher Binding Affinity of the CR3022 Antibody for SARS-CoV-2 than the 4A8 Antibody Hung Nguyen, Pham Dang Lan, Daniel A. Nissley, Edward P. O’Brien, Mai Suan Li
7 [GO] 2021―Jun―11 Targeting SARS-CoV-2 Receptor Binding Domain with Stapled Peptides: An In Silico Study Luana Janaína de Campos, Nicholas Y. Palermo, Martin Conda-Sheridan
8 [GO] 2021―Jun―10 Structural and Dynamical Differences in the Spike Protein RBD in the SARS-CoV-2 Variants B.1.1.7 and B.1.351 Nisha Bhattarai, Prabin Baral, Bernard S. Gerstman, Prem P. Chapagain
9 [GO] 2021―May―12 Critical Interactions Between the SARS-CoV-2 Spike Glycoprotein and the Human ACE2 Receptor Elhan Taka, Sema Z. Yilmaz, Mert Golcuk, Ceren Kilinc, Umut Aktas, Ahmet Yildiz, Mert Gur
10 [GO] 2021―Apr―30 Integrated Biophysical Modeling of the SARS-CoV-2 Spike Protein Binding and Allosteric Interactions with Antibodies Gennady M. Verkhivker, Luisa Di Paola
11 [GO] 2021―Apr―23 Fast Prediction of Binding Affinities of the SARS-CoV-2 Spike Protein Mutant N501Y (UK Variant) with ACE2 and Miniprotein Drug Candidates Alexander H. Williams, Chang-Guo Zhan
12 [GO] 2021―Mar―03 An Active Site Inhibitor Induces Conformational Penalties for ACE2 Recognition by the Spike Protein of SARS-CoV-2 Billy J. Williams-Noonan, Nevena Todorova, Ketav Kulkarni, Marie-Isabel Aguilar, Irene Yarovsky
13 [GO] 2021―Jan―15 Dynamic Network Modeling of Allosteric Interactions and Communication Pathways in the SARS-CoV-2 Spike Trimer Mutants: Differential Modulation of Conformational Landscapes and Signal Transmission via Cascades of Regulatory Switches Gennady M. Verkhivker, Luisa Di Paola
14 [GO] 2020―Dec―02 Remdesivir Strongly Binds to Both RNA-Dependent RNA Polymerase and Main Protease of SARS-CoV-2: Evidence from Molecular Simulations Hoang Linh Nguyen, Nguyen Quoc Thai, Duc Toan Truong, Mai Suan Li
15 [GO] 2020―Nov―17 Computational Design of 25-mer Peptide Binders of SARS-CoV-2 Thassanai Sitthiyotha, Surasak Chunsrivirot
16 [GO] 2020―Nov―15 Revealing the Inhibition Mechanism of RNA-Dependent RNA Polymerase (RdRp) of SARS-CoV-2 by Remdesivir and Nucleotide Analogues: A Molecular Dynamics Simulation Study Padmaja D. Wakchaure, Shibaji Ghosh, Bishwajit Ganguly
17 [GO] 2020―Nov―11 How Alcoholic Disinfectants Affect Coronavirus Model Membranes: Membrane Fluidity, Permeability, and Disintegration Hossein Eslami, Shubhadip Das, Tianhang Zhou, Florian Müller-Plathe
18 [GO] 2020―Oct―28 Critical Sequence Hotspots for Binding of Novel Coronavirus to Angiotensin Converter Enzyme as Evaluated by Molecular Simulations Mahdi Ghorbani, Bernard R. Brooks, Jeffery B. Klauda
19 [GO] 2020―Oct―23 Antiviral Peptides as Promising Therapeutics against SARS-CoV-2 Surid Mohammad Chowdhury, Shafi Ahmad Talukder, Akib Mahmud Khan, Nadia Afrin, Md Ackas Ali, Rajib Islam, et al. (+6)
20 [GO] 2020―Jul―29 Does SARS-CoV-2 Bind to Human ACE2 Stronger Than SARS-CoV? Hoang Linh Nguyen, Pham Dang Lan, Nguyen Quoc Thai, Daniel A. Nissley, Edward P. O'Brien, Mai Suan Li
21 [GO] 2020―Jun―19 Developing a Fully-glycosylated Full-length SARS-CoV-2 Spike Protein Model in a Viral Membrane Hyeonuk Woo, Sang-Jun Park, Yeol Kyo Choi, Taeyong Park, Maham Tanveer, Yiwei Cao, et al. (+6)
22 [GO] 2020―Jun―17 Critical Differences Between the Binding Features of the Spike Proteins of SARS-CoV-2 and SARS-CoV Chen Bai, Arieh Warshel
23 [GO] 2020―Jun―10 Structural basis of potential binding mechanism of remdesivir to SARS-CoV-2 RNA dependent RNA polymerase Leili Zhang, Ruhong Zhou


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