col blocks we are bridge builder col blocks
COVID answers in Scientific Journals all over the world


47 Results       Page 1

 [1] 
Springer (Biomed Central Ltd.): BMC Genomics
  original article Date Title Authors   All Authors
1 [GO] 2026―May―29 Genomic analysis of Vibrio cholerae in Western Kenya (2015-2023) reveals persistence of pandemic ST69 and presence of the European-associated ST8 lineage Erick C Kipkirui, Vanessa Natasha, Collins Kigen, James W Muturi, Ronald K Kirera, Margaret C Koech, et al. (+7)
2 [GO] 2026―Feb―24 Temporal and gene-specific dynamics of codon usage evolution in SARS-CoV-2 genomes Paweł Błażej, Dorota Mackiewicz, Paweł Mackiewicz
3 [GO] 2026―Feb―14 The genomic diversity of SARS-CoV-2 Omicron lineages collected during routine sentinel surveillance in Tanzania between November 2022 and July 2023 Lawrence Amon Mapunda, Maria Ezekiely Kelly, Shimba Henerico, Monica Francis, Azizi Ituka, Omega Machange, et al. (+13)
4 [GO] 2025―Oct―21 Natural selection exerted by historical coronavirus epidemic(s): comparative genetic analysis in China Kadoorie Biobank and UK Biobank Sam Morris, Kuang Lin, Iona Y. Millwood, Canqing Yu, Jun Lv, Pei Pei, et al. (+5)
5 [GO] 2025―Oct―14 Genomic diversity and surveillance of SARS-CoV-2 in Nigeria Thomas J. Y. Kono, Ezenwa J. Onyemata, Natalia Blanco, Chika K. Onwuamah, Nnaemeka Ndodo, Paul Oluniyi, et al. (+35)
6 [GO] 2025―Sep―26 Complete genome sequence analysis of Sarbecovirus (severe acute respiratory syndrome-related coronaviruses) from Zimbabwean insectivorous bats Vimbiso Chidoti, Anaïs Loisier, Taona Zinyakasa, Mathieu Bourgarel, Valérie Pinarello, Gift Matope, et al. (+5)
7 [GO] 2025―Aug―28 Peripheral transcriptional responses to experimental SARS-CoV-2 inoculation in North American elk cows and calves Bruna Petry, Kaitlyn M. Sarlo Davila, Alexandra C. Buckley, Eric D. Cassmann, Steven. C. Olsen, Paola M. Boggiatto, et al. (+2)
8 [GO] 2025―Mar―21 Altered structural and transporter-related gene expression patterns in the placenta play a role in fetal demise during Porcine reproductive and respiratory syndrome virus infection Angelica Van Goor, Alex Pasternak, Kristen E. Walker, Shannon Chick, John C. S. Harding, Joan K. Lunney
9 [GO] 2025―Mar―21 Seminal plasma proteomics of asymptomatic COVID-19 patients reveals disruption of male reproductive function Jialyu Huang, Yufang Su, Jiawei Wang, Zheng Fang, Yiwei Zhang, Hong Chen, et al. (+5)
10 [GO] 2025―Jan―29 Unsupervised detection of novel SARS-CoV-2 mutations and lineages in wastewater samples using long-read sequencing Ignacio Garcia, Rasmus K. Riis, Line V. Moen, Andreas Rohringer, Elisabeth H. Madslien, Karoline Bragstad
11 [GO] 2024―Dec―30 Cov-trans: an efficient algorithm for discontinuous transcript assembly in coronaviruses Xiaoyu Guo, Zhenming Wu, Shu Zhang, Jin Zhao
12 [GO] 2024―Nov―11 Sustained applicability of SARS-CoV-2 variants identification by Sanger Sequencing Strategy on emerging various SARS-CoV-2 Omicron variants in Hiroshima, Japan Chanroth Chhoung, Ko Ko, Serge Ouoba, Zayar Phyo, Golda Ataa Akuffo, Aya Sugiyama, et al. (+5)
13 [GO] 2024―Oct―21 Comparison of genotypic features between two groups of antibiotic resistant Klebsiella pneumoniae clinical isolates obtained before and after the COVID-19 pandemic from Egypt Pansee Gamaleldin, Mustafa Alseqely, Benjamin A. Evans, Hoda Omar, Alaa Abouelfetouh
14 [GO] 2024―Oct―21 Fine-tuning of a CRISPRi screen in the seventh pandemic Vibrio cholerae Kevin Debatisse, Théophile Niault, Sarah Peeters, Amandine Maire, Busra Toktas, Baptiste Darracq, et al. (+4)
15 [GO] 2024―Jun―28 UnCoVar: a reproducible and scalable workflow for transparent and robust virus variant calling and lineage assignment using SARS-CoV-2 as an example Alexander Thomas, Thomas Battenfeld, Ivana Kraiselburd, Olympia Anastasiou, Ulf Dittmer, Ann-Kathrin Dörr, et al. (+11)
16 [GO] 2024―May―16 Genomic analysis of severe COVID-19 considering or not asthma comorbidity: GWAS insights from the BQC19 cohort Omayma Amri, Anne-Marie Madore, Anne-Marie Boucher-Lafleur, Catherine Laprise
17 [GO] 2024―May―01 Ocular A-to-I RNA editing signatures associated with SARS-CoV-2 infection Yun-Yun Jin, Ya-Ping Liang, Wen-Hao Huang, Liang Guo, Li-Li Cheng, Tian-Tian Ran, et al. (+3)
18 [GO] 2024―Apr―17 Comprehensive genomic analysis of the SARS-CoV-2 Omicron variant BA.2.76 in Jining City, China, 2022 Qiang Yin, Wei Liu, Yajuan Jiang, Qiang Feng, Xiaoyu Wang, Huixin Dou, et al. (+5)
19 [GO] 2024―Mar―12 Decoding HiPSC-CM’s Response to SARS-CoV-2: mapping the molecular landscape of cardiac injury Sicheng Chen, Zhenquan Fu, Kaitong Chen, Xinyao Zheng, Zhenyang Fu
20 [GO] 2024―Jan―13 Chronic shedding of a SARS-CoV-2 Alpha variant in wastewater Michael J. Conway, Hannah Yang, Lauren A. Revord, Michael P. Novay, Rachel J. Lee, Avery S. Ward, et al. (+4)
21 [GO] 2023―Oct―18 Potential network markers and signaling pathways for B cells of COVID-19 based on single-cell condition-specific networks Ying Li, Liqin Han, Peiluan Li, Jing Ge, Yun Xue, Luonan Chen
22 [GO] 2023―Jul―10 The 29-nucleotide deletion in SARS-CoV: truncated versions of ORF8 are under purifying selection Anastassia Bykova, Andreu Saura, Galina V. Glazko, Abiel Roche-Lima, Vyacheslav Yurchenko, Igor B. Rogozin
23 [GO] 2023―Jun―12 Integrative multi-omics approach for identifying molecular signatures and pathways and deriving and validating molecular scores for COVID-19 severity and status Danika Lipman, Sandra E. Safo, Thierry Chekouo
24 [GO] 2023―Jun―10 Genomic surveillance of severe acute respiratory syndrome coronavirus 2 in Burundi, from May 2021 to January 2022 Cassien Nduwimana, Néhémie Nzoyikorera, Armstrong Ndihokubwayo, Théogène Ihorimbere, Célestin Nibogora, Adolphe Ndoreraho, et al. (+5)
25 [GO] 2023―May―18 A new profiling approach for DNA sequences based on the nucleotides' physicochemical features for accurate analysis of SARS-CoV-2 genomes Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi
26 [GO] 2023―Jan―10 Evaluation and limitations of different approaches among COVID-19 fatal cases using whole-exome sequencing data Natalia Forgacova, Zuzana Holesova, Rastislav Hekel, Tatiana Sedlackova, Zuzana Pos, Lucia Krivosikova, et al. (+8)
27 [GO] 2023―Jan―05 Correction: A common methodological phylogenomics framework for intra-patient heteroplasmies to infer SARS-CoV-2 sublineages and tumor clones Filippo Utro, Chaya Levovitz, Kahn Rhrissorrakrai, Laxmi Parida
28 [GO] 2022―Nov―17 A two-step process for in silico screening to assess the performance of qRTPCR kits against variant strains of SARS-CoV-2 Swati Gupta, Amit Kumar, Nivedita Gupta, Deepak R. Bharti, Neeraj Aggarwal, Vasanthapuram Ravi
29 [GO] 2022―Oct―18 Cov2clusters: genomic clustering of SARS-CoV-2 sequences Benjamin Sobkowiak, Kimia Kamelian, James E. A. Zlosnik, John Tyson, Anders Gonçalves da Silva, Linda M. N. Hoang, et al. (+2)
30 [GO] 2022―Sep―01 Genomic surveillance of SARS-COV-2 reveals diverse circulating variant lineages in Nairobi and Kiambu Counties, Kenya Josiah O. Kuja, Bernard N. Kanoi, Renzo F. Balboa, Clement Shiluli, Michael Maina, Harrison Waweru, et al. (+8)
31 [GO] 2022―Jul―15 Genomic surveillance of SARS-CoV-2 in US military compounds in Afghanistan reveals multiple introductions and outbreaks of Alpha and Delta variants Irina Maljkovic Berry, Jun Hang, Christian Fung, Yu Yang, Marcus Chibucos, Adam Pollio, et al. (+6)
32 [GO] 2022―Jul―14 Phylogenetic analysis and comparative genomics of SARS-CoV-2 from survivor and non-survivor COVID-19 patients in Cordoba, Argentina Nadia B. Olivero, Ana S. Gonzalez-Reiche, Viviana E. Re, Gonzalo M. Castro, María B. Pisano, Paola Sicilia, et al. (+13)
33 [GO] 2022―Jun―03 SARS-CoV-2 Delta variant isolates from vaccinated individuals Lauren Brinkac, Sheila Diepold, Shane Mitchell, Stephanie Sarnese, Lee F. Kolakowski, William M. Nelson, Katharine Jennings
34 [GO] 2022―May―30 A random priming amplification method for whole genome sequencing of SARS-CoV-2 virus Klaudia Chrzastek, Chandana Tennakoon, Dagmara Bialy, Graham Freimanis, John Flannery, Holly Shelton
35 [GO] 2022―Apr―22 Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq Derek Tshiabuila, Jennifer Giandhari, Sureshnee Pillay, Upasana Ramphal, Yajna Ramphal, Arisha Maharaj, et al. (+7)
36 [GO] 2022―Apr―11 DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2 Alexander Yermanos, Kai-Lin Hong, Andreas Agrafiotis, Jiami Han, Sarah Nadeau, Cecilia Valenzuela, et al. (+17)
37 [GO] 2022―Apr―04 Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B.1.43 strain in the USA Longhua Guo, James Boocock, Evann E. Hilt, Sukantha Chandrasekaran, Yi Zhang, Chetan Munugala, et al. (+11)
38 [GO] 2022―Feb―11 Pango lineage designation and assignment using SARS-CoV-2 spike gene nucleotide sequences Áine O’Toole, Oliver G. Pybus, Michael E. Abram, Elizabeth J. Kelly, Andrew Rambaut
39 [GO] 2021―Nov―17 A common methodological phylogenomics framework for intra-patient heteroplasmies to infer SARS-CoV-2 sublineages and tumor clones Filippo Utro, Chaya Levovitz, Kahn Rhrissorrakrai, Laxmi Parida
40 [GO] 2021―Oct―30 SARS-CoV-2 surveillance in Italy through phylogenomic inferences based on Hamming distances derived from pan-SNPs, -MNPs and -InDels Adriano Di Pasquale, Nicolas Radomski, Iolanda Mangone, Paolo Calistri, Alessio Lorusso, Cesare Cammà
41 [GO] 2021―Jul―14 Whole genome sequencing and phylogenetic analysis of six SARS-CoV-2 strains isolated during COVID-19 pandemic in Tunisia, North Africa Wasfi Fares, Anissa Chouikha, Kais Ghedira, Meriam Gdoura, Dorra Rezig, Sondes Haddad Boubaker, et al. (+14)
42 [GO] 2021―May―20 Genomic epidemiology of SARS-CoV-2 in Esteio, Rio Grande do Sul, Brazil Vinícius Bonetti Franceschi, Gabriel Dickin Caldana, Amanda de Menezes Mayer, Gabriela Bettella Cybis, Carla Andretta Moreira Neves, Patrícia Aline Gröhs Ferrareze, et al. (+10)
43 [GO] 2021―May―17 Population genetic considerations for using biobanks as international resources in the pandemic era and beyond Hannah Carress, Daniel John Lawson, Eran Elhaik
44 [GO] 2021―Mar―12 Unveiling the long non-coding RNA profile of porcine reproductive and respiratory syndrome virus-infected porcine alveolar macrophages Junxin Gao, Yu Pan, Yunfei Xu, Wenli Zhang, Lin Zhang, Xi Li, et al. (+3)
45 [GO] 2021―Feb―18 SARS-CoV-2 early infection signature identified potential key infection mechanisms and drug targets Yue Li, Ashley Duche, Michael R. Sayer, Don Roosan, Farid G. Khalafalla, Rennolds S. Ostrom, et al. (+2)
46 [GO] 2021―Jan―20 Identification and analysis of long non-coding RNAs and mRNAs in chicken macrophages infected with avian infectious bronchitis coronavirus Hao Li, Pengfei Cui, Xue Fu, Lan Zhang, Wenjun Yan, Yaru Zhai, et al. (+3)
47 [GO] 2020―Dec―04 A rapid, cost-effective tailed amplicon method for sequencing SARS-CoV-2 Daryl M. Gohl, John Garbe, Patrick Grady, Jerry Daniel, Ray H. B. Watson, Benjamin Auch, et al. (+3)
 [1] 

47 Results       Page 1


[de][en]

Last change 2025―Jul―29 14:55:09 UTC

© Daten-Quadrat 2022       Done in 0.004 sec