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COVID answers in Scientific Journals all over the world


71 Results       Page 1

 [1] 
American Society for Microbiology: mSystems
  original article Date Title Authors   All Authors
1 [GO] 2025―Apr―22 Longitudinal dynamics of the nasopharyngeal microbiome in response to SARS-CoV-2 Omicron variant and HIV infection in Kenyan women and their children Ayla Žuštra, Victoria R. Leonard, LaRinda A. Holland, James C. Hu, Tianchen Mu, Steven C. Holland, et al. (+12)
2 [GO] 2024―May―31 SARS-CoV-2 wastewater variant surveillance: pandemic response leveraging FDA’s GenomeTrakr network Ruth E. Timme, Jacquelina Woods, Jessica L. Jones, Kevin R. Calci, Rachel Rodriguez, Candace Barnes, et al. (+108)
3 [GO] 2024―May―16 Comparative analysis of dynamic transcriptomes reveals specific COVID-19 features and pathogenesis of immunocompromised populations Xiaodi Yang, Jialin Zhu, Qingyun Wang, Bo Tang, Ye Shen, Bingjie Wang, et al. (+7)
4 [GO] 2024―May―03 Association between gut microbiota dysbiosis and poor functional outcomes in acute ischemic stroke patients with COVID-19 infection Jiaying Chen, Xuxuan Gao, Jingru Liang, Qiheng Wu, Linlin Shen, Yifeng Zheng, et al. (+5)
5 [GO] 2024―Apr―02 A novel fast hybrid capture sequencing method for high-efficiency common human coronavirus whole-genome acquisition Zixinrong Meng, Shuo Wang, Liping Yu, Kangchen Zhao, Tao Wu, Xiaojuan Zhu, et al. (+7)
6 [GO] 2023―Dec―14 The most exposed regions of SARS-CoV-2 structural proteins are subject to strong positive selection and gene overlap may locally modify this behavior Alejandro Rubio, Maria de Toro, Antonio J. Pérez-Pulido, Irina El Khoury
7 [GO] 2023―Oct―24 Methylprednisolone therapy induces differential metabolic trajectories in severe COVID-19 patients Victor I. Mwangi, Rebeca L. A. Netto, Mayla G. S. Borba, Gabriel F. Santos, Gesiane S. Lima, Lucas S. Machado, et al. (+15)
8 [GO] 2023―Aug―07 The intestinal microbiota predicts COVID-19 severity and fatality regardless of hospital feeding method Vanni Bucci, Doyle V. Ward, Shakti Bhattarai, Mayra Rojas-Correa, Ayan Purkayastha, Devon Holler, et al. (+13)
9 [GO] 2023―Jul―25 Bayesian sequential approach to monitor COVID-19 variants through test positivity rate from wastewater J. Cricelio Montesinos-López, Maria L. Daza-Torres, Yury E. García, César Herrera, C. Winston Bess, Heather N. Bischel, et al. (+2)
10 [GO] 2023―Jul―11 Paired associated SARS-CoV-2 spike variable positions: a network analysis approach to emerging variants Yiannis Manoussopoulos, Cleo Anastassopoulou, John P. A. Ioannidis, Athanasios Tsakris, Ileana M. Cristea
11 [GO] 2023―Jun―14 High-sensitivity profiling of SARS-CoV-2 noncoding region-host protein interactome reveals the potential regulatory role of negative-sense viral RNA Liuyiqi Jiang, Mu Xiao, Qing-Qing Liao, Luqian Zheng, Chunyan Li, Yuemei Liu, et al. (+5)
12 [GO] 2023―Jun―13 Diversity, composition, and networking of saliva microbiota distinguish the severity of COVID-19 episodes as revealed by an analysis of 16S rRNA variable V1-V3 region sequences Violeta Larios Serrato, Beatriz Meza, Carolina Gonzalez-Torres, Javier Gaytan-Cervantes, Joaquín González Ibarra, Clara Esperanza Santacruz Tinoco, et al. (+14)
13 [GO] 2023―Mar―02 The Coming of Age of Nucleic Acid Vaccines during COVID-19 Halie M. Rando, Ronan Lordan, Likhitha Kolla, Elizabeth Sell, Alexandra J. Lee, Nils Wellhausen, et al. (+56)
14 [GO] 2023―Mar―02 Application of Traditional Vaccine Development Strategies to SARS-CoV-2 Halie M. Rando, Ronan Lordan, Alexandra J. Lee, Amruta Naik, Nils Wellhausen, Elizabeth Sell, et al. (+56)
15 [GO] 2022―Dec―12 A 2-Gene Host Signature for Improved Accuracy of COVID-19 Diagnosis Agnostic to Viral Variants Jack Albright, Eran Mick, Estella Sanchez-Guerrero, Jack Kamm, Anthea Mitchell, Angela M. Detweiler, et al. (+10)
16 [GO] 2022―Jun―15 Sentinel Cards Provide Practical SARS-CoV-2 Monitoring in School Settings Victor J. Cantú, Karenina Sanders, Pedro Belda-Ferre, Rodolfo A. Salido, Rebecca Tsai, Brett Austin, et al. (+30)
17 [GO] 2022―Jun―15 Implementation of Practical Surface SARS-CoV-2 Surveillance in School Settings Victor J. Cantú, Pedro Belda-Ferre, Rodolfo A. Salido, Rebecca Tsai, Brett Austin, William Jordan, et al. (+32)
18 [GO] 2022―May―31 Obesity: Policy and Practice Recommendations for High-Risk Populations Influenced by the COVID-19 Pandemic Kathryn N. Robinson, Deborah A. Saber, Suzanne Lynn Ishaq
19 [GO] 2022―May―18 Stability of SARS-CoV-2-Encoded Proteins and Their Antibody Levels Correlate with Interleukin 6 in COVID-19 Patients Wangyang Li, Georgios D. Kitsios, William Bain, Chenxiao Wang, Tiao Li, Kristen V. Fanning, et al. (+6)
20 [GO] 2022―May―18 Putative Host-Derived Insertions in the Genomes of Circulating SARS-CoV-2 Variants Yiyan Yang, Keith Dufault-Thompson, Rafaela Salgado Fontenele, Xiaofang Jiang, Sergio Baranzini
21 [GO] 2022―May―16 SARS-CoV-2 Distribution in Residential Housing Suggests Contact Deposition and Correlates with Rothia sp. Victor J. Cantú, Rodolfo A. Salido, Shi Huang, Gibraan Rahman, Rebecca Tsai, Holly Valentine, et al. (+35)
22 [GO] 2022―Mar―21 Mapping Data to Deep Understanding: Making the Most of the Deluge of SARS-CoV-2 Genome Sequences Bahrad A. Sokhansanj, Gail L. Rosen, Marta M. Gaglia
23 [GO] 2022―Jan―25 Correction for Rando et al., “Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure” Halie M. Rando, Adam L. MacLean, Alexandra J. Lee, Ronan Lordan, Sandipan Ray, Vikas Bansal, et al. (+27)
24 [GO] 2021―Nov―23 A Genetic Trap in Yeast for Inhibitors of SARS-CoV-2 Main Protease Hanna Alalam, Sunniva Sigurdardóttir, Catarina Bourgard, Ievgeniia Tiukova, Ross D. King, Morten Grøtli, et al. (+2)
25 [GO] 2021―Nov―02 Identification and Development of Therapeutics for COVID-19 Halie M. Rando, Nils Wellhausen, Soumita Ghosh, Alexandra J. Lee, Anna Ada Dattoli, Fengling Hu, et al. (+18)
26 [GO] 2021―Nov―02 Analysis of SARS-CoV-2 RNA Persistence across Indoor Surface Materials Reveals Best Practices for Environmental Monitoring Programs Rodolfo A. Salido, Victor J. Cantú, Alex E. Clark, Sandra L. Leibel, Anahid Foroughishafiei, Anushka Saha, et al. (+38)
27 [GO] 2021―Oct―26 Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure Halie M. Rando, Adam L. MacLean, Alexandra J. Lee, Ronan Lordan, Sandipan Ray, Vikas Bansal, et al. (+28)
28 [GO] 2021―Oct―26 Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure Halie M. Rando, Adam L. MacLean, Alexandra J. Lee, Ronan Lordan, Sandipan Ray, Vikas Bansal, et al. (+28)
29 [GO] 2021―Oct―19 Assessing Multiplex Tiling PCR Sequencing Approaches for Detecting Genomic Variants of SARS-CoV-2 in Municipal Wastewater Xuan Lin, Melissa Glier, Kevin Kuchinski, Tenysha Ross-Van Mierlo, David McVea, John R. Tyson, et al. (+3)
30 [GO] 2021―Oct―19 Assessing Multiplex Tiling PCR Sequencing Approaches for Detecting Genomic Variants of SARS-CoV-2 in Municipal Wastewater Xuan Lin, Melissa Glier, Kevin Kuchinski, Tenysha Ross-Van Mierlo, David McVea, John R. Tyson, et al. (+3)
31 [GO] 2021―Sep―14 High-Frequency, High-Throughput Quantification of SARS-CoV-2 RNA in Wastewater Settled Solids at Eight Publicly Owned Treatment Works in Northern California Shows Strong Association with COVID-19 Incidence Marlene K. Wolfe, Aaron Topol, Alisha Knudson, Adrian Simpson, Bradley White, Duc J. Vugia, et al. (+8)
32 [GO] 2021―Sep―14 High-Frequency, High-Throughput Quantification of SARS-CoV-2 RNA in Wastewater Settled Solids at Eight Publicly Owned Treatment Works in Northern California Shows Strong Association with COVID-19 Incidence Marlene K. Wolfe, Aaron Topol, Alisha Knudson, Adrian Simpson, Bradley White, Duc J. Vugia, et al. (+8)
33 [GO] 2021―Aug―10 Rapid, Large-Scale Wastewater Surveillance and Automated Reporting System Enable Early Detection of Nearly 85% of COVID-19 Cases on a University Campus Smruthi Karthikeyan, Andrew Nguyen, Daniel McDonald, Yijian Zong, Nancy Ronquillo, Junting Ren, et al. (+11)
34 [GO] 2021―Aug―10 Rapid, Large-Scale Wastewater Surveillance and Automated Reporting System Enable Early Detection of Nearly 85% of COVID-19 Cases on a University Campus Smruthi Karthikeyan, Andrew Nguyen, Daniel McDonald, Yijian Zong, Nancy Ronquillo, Junting Ren, et al. (+11)
35 [GO] 2021―Aug―03 Catching SARS-CoV-2 by Sequence Hybridization: a Comparative Analysis Alexandra Rehn, Peter Braun, Mandy Knüpfer, Roman Wölfel, Markus H. Antwerpen, Mathias C. Walter, Rachel Mackelprang
36 [GO] 2021―Aug―03 Catching SARS-CoV-2 by Sequence Hybridization: a Comparative Analysis Alexandra Rehn, Peter Braun, Mandy Knüpfer, Roman Wölfel, Markus H. Antwerpen, Mathias C. Walter, Rachel Mackelprang
37 [GO] 2021―Jul―27 Pathophysiology of SARS-CoV-2 Infection in the Upper Respiratory Tract and Its Relation to Breath Volatile Organic Compounds Moria Lichtenstein, Sondra Turjerman, Jayant M. Pinto, Orna Barash, Omry Koren, Jotham Suez
38 [GO] 2021―Jul―27 Teaching with Microbes: Lessons from Fermentation during a Pandemic Megan A. Carney, Suzanne Lynn Ishaq
39 [GO] 2021―Jul―27 Pathophysiology of SARS-CoV-2 Infection in the Upper Respiratory Tract and Its Relation to Breath Volatile Organic Compounds Moria Lichtenstein, Sondra Turjerman, Jayant M. Pinto, Orna Barash, Omry Koren, Jotham Suez
40 [GO] 2021―Jul―27 Teaching with Microbes: Lessons from Fermentation during a Pandemic Megan A. Carney, Suzanne Lynn Ishaq
41 [GO] 2021―Jul―13 RNA-Protein Interaction Analysis of SARS-CoV-2 5′ and 3′ Untranslated Regions Reveals a Role of Lysosome-Associated Membrane Protein-2a during Viral Infection Rohit Verma, Sandhini Saha, Shiv Kumar, Shailendra Mani, Tushar Kanti Maiti, Milan Surjit, Marta M. Gaglia
42 [GO] 2021―Jul―13 RNA-Protein Interaction Analysis of SARS-CoV-2 5′ and 3′ Untranslated Regions Reveals a Role of Lysosome-Associated Membrane Protein-2a during Viral Infection Rohit Verma, Sandhini Saha, Shiv Kumar, Shailendra Mani, Tushar Kanti Maiti, Milan Surjit, Marta M. Gaglia
43 [GO] 2021―Jun―15 Rapid Increase of SARS-CoV-2 Variant B.1.1.7 Detected in Sewage Samples from England between October 2020 and January 2021 Thomas Wilton, Erika Bujaki, Dimitra Klapsa, Manasi Majumdar, Maria Zambon, Martin Fritzsche, et al. (+3)
44 [GO] 2021―May―10 Dietary Supplements and Nutraceuticals under Investigation for COVID-19 Prevention and Treatment Ronan Lordan, Halie M. Rando, Casey S. Greene, Jack A. Gilbert
45 [GO] 2021―Apr―24 COVID-19 Pandemic in Lebanon: One Year Later, What Have We Learnt? Jad Koweyes, Tamara Salloum, Siwar Haidar, Georgi Merhi, Sima Tokajian, Suleyman Yildirim
46 [GO] 2021―Apr―24 COVID-19 Pandemic in Lebanon: One Year Later, What Have We Learnt? Jad Koweyes, Tamara Salloum, Siwar Haidar, Georgi Merhi, Sima Tokajian, Suleyman Yildirim
47 [GO] 2021―Apr―19 Indoor Dust as a Matrix for Surveillance of COVID-19 Nicole Renninger, Nicholas Nastasi, Ashleigh Bope, Samuel J. Cochran, Sarah R. Haines, Neeraja Balasubrahmaniam, et al. (+6)
48 [GO] 2021―Apr―19 Indoor Dust as a Matrix for Surveillance of COVID-19 Nicole Renninger, Nicholas Nastasi, Ashleigh Bope, Samuel J. Cochran, Sarah R. Haines, Neeraja Balasubrahmaniam, et al. (+6)
49 [GO] 2021―Mar―08 High-Throughput Wastewater SARS-CoV-2 Detection Enables Forecasting of Community Infection Dynamics in San Diego County Smruthi Karthikeyan, Nancy Ronquillo, Pedro Belda-Ferre, Destiny Alvarado, Tara Javidi, Christopher A. Longhurst, et al. (+2)
50 [GO] 2021―Mar―08 High-Throughput Wastewater SARS-CoV-2 Detection Enables Forecasting of Community Infection Dynamics in San Diego County Smruthi Karthikeyan, Nancy Ronquillo, Pedro Belda-Ferre, Destiny Alvarado, Tara Javidi, Christopher A. Longhurst, et al. (+2)
51 [GO] 2021―Feb―23 Comparative Genomics and Integrated Network Approach Unveiled Undirected Phylogeny Patterns, Co-mutational Hot Spots, Functional Cross Talk, and Regulatory Interactions in SARS-CoV-2 Vipin Gupta, Shazia Haider, Mansi Verma, Nirjara Singhvi, Kalaisaran Ponnusamy, Md. Zubbair Malik, et al. (+8)
52 [GO] 2020―Dec―01 Coordinating and Assisting Research at the SARS-CoV-2/Microbiome Nexus
53 [GO] 2020―Nov―02 Handwashing and Detergent Treatment Greatly Reduce SARS-CoV-2 Viral Load on Halloween Candy Handled by COVID-19 Patients Rodolfo A. Salido, Sydney C. Morgan, Maria I. Rojas, Celestine G. Magallanes, Clarisse Marotz, Peter DeHoff, et al. (+9)
54 [GO] 2020―Oct―06 End-to-End Protocol for the Detection of SARS-CoV-2 from Built Environments Ceth W. Parker, Nitin Singh, Scott Tighe, Adriana Blachowicz, Jason M. Wood, Arman Seuylemezian, et al. (+12)
55 [GO] 2020―Sep―21 In Silico Structure-Based Repositioning of Approved Drugs for Spike Glycoprotein S2 Domain Fusion Peptide of SARS-CoV-2: Rationale from Molecular Dynamics and Binding Free Energy Calculations Nishant Shekhar, Phulen Sarma, Manisha Prajapat, Pramod Avti, Hardeep Kaur, Anupam Raja, et al. (+7)
56 [GO] 2020―Sep―01 Low Baseline Pulmonary Levels of Cytotoxic Lymphocytes as a Predisposing Risk Factor for Severe COVID-19 Pascal H. G. Duijf, Paola Flórez de Sessions
57 [GO] 2020―Aug―17 Oscillatory Dynamics in Infectivity and Death Rates of COVID-19 Tomáš Pavlíček, Pavel Rehak, Petr Král, Jack A. Gilbert
58 [GO] 2020―Jul―27 Comparative Genomic Analysis of Rapidly Evolving SARS-CoV-2 Reveals Mosaic Pattern of Phylogeographical Distribution Roshan Kumar, Helianthous Verma, Nirjara Singhvi, Utkarsh Sood, Vipin Gupta, Mona Singh, et al. (+12)
59 [GO] 2020―Jul―21 COVID-19 and the Gut Microbiome: More than a Gut Feeling Daniel van der Lelie, Safiyh Taghavi, Ileana M. Cristea
60 [GO] 2020―Jul―21 SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases Fuqing Wu, Jianbo Zhang, Amy Xiao, Xiaoqiong Gu, Wei Lin Lee, Federica Armas, et al. (+14)
61 [GO] 2020―Jul―13 Oscillations in U.S. COVID-19 Incidence and Mortality Data Reflect Diagnostic and Reporting Factors Aviv Bergman, Yehonatan Sella, Peter Agre, Arturo Casadevall, John F. Rawls
62 [GO] 2020―Jun―22 Reply to McDonald, “Protections against the Risk of Airborne SARS-CoV-2 Infection” Leslie Dietz, Patrick F. Horve, David A. Coil, Mark Fretz, Jonathan A. Eisen, Kevin Van Den Wymelenberg
63 [GO] 2020―Jun―22 Reply to McDonald, “Protections against the Risk of Airborne SARS-CoV-2 Infection” Leslie Dietz, Patrick F. Horve, David A. Coil, Mark Fretz, Jonathan A. Eisen, Kevin Van Den Wymelenberg
64 [GO] 2020―Jun―19 Protections against the Risk of Airborne SARS-CoV-2 Infection Clement J. McDonald, Jack A. Gilbert
65 [GO] 2020―Jun―19 Protections against the Risk of Airborne SARS-CoV-2 Infection Clement J. McDonald, Jack A. Gilbert
66 [GO] 2020―May―05 Correction for Dietz et al., “2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission” Leslie Dietz, Patrick F. Horve, David A. Coil, Mark Fretz, Jonathan A. Eisen, Kevin Van Den Wymelenberg
67 [GO] 2020―May―05 SARS-CoV-2 and ORF3a: Nonsynonymous Mutations, Functional Domains, and Viral Pathogenesis Elio Issa, Georgi Merhi, Balig Panossian, Tamara Salloum, Sima Tokajian, Jack A. Gilbert
68 [GO] 2020―May―05 Correction for Dietz et al., “2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission” Leslie Dietz, Patrick F. Horve, David A. Coil, Mark Fretz, Jonathan A. Eisen, Kevin Van Den Wymelenberg
69 [GO] 2020―May―05 SARS-CoV-2 and ORF3a: Nonsynonymous Mutations, Functional Domains, and Viral Pathogenesis Elio Issa, Georgi Merhi, Balig Panossian, Tamara Salloum, Sima Tokajian, Jack A. Gilbert
70 [GO] 2020―Apr―13 Repurposing Didanosine as a Potential Treatment for COVID-19 Using Single-Cell RNA Sequencing Data Fadhl M. Alakwaa, Jack A. Gilbert
71 [GO] 2020―Apr―06 2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission Leslie Dietz, Patrick F. Horve, David A. Coil, Mark Fretz, Jonathan A. Eisen, Kevin Van Den Wymelenberg, Jack A. Gilbert
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