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COVID answers in Scientific Journals all over the world


23 Results       Page 1

 [1] 
Oxford University Press: Bioinformatics
  original article Date Title Authors   All Authors
1 [GO] 2023―Oct―17 Adaptive learning embedding features to improve the predictive performance of SARS-CoV-2 phosphorylation sites Shihu Jiao, Xiucai Ye, Chunyan Ao, Tetsuya Sakurai, Quan Zou, Lei Xu, Janet Kelso
2 [GO] 2023―Aug―30 Tracking and curating putative SARS-CoV-2 recombinants with RIVET Kyle Smith, Cheng Ye, Yatish Turakhia, Janet Kelso
3 [GO] 2023―May―25 DeepCoVDR: deep transfer learning with graph transformer and cross-attention for predicting COVID-19 drug response Zhijian Huang, Pan Zhang, Lei Deng
4 [GO] 2022―Nov―16 Gene set proximity analysis: expanding gene set enrichment analysis through learned geometric embeddings, with drug-repurposing applications in COVID-19 Henry Cousins, Taryn Hall, Yinglong Guo, Luke Tso, Kathy T H Tzeng, Le Cong, et al. (+2)
5 [GO] 2022―Oct―14 Common data model for COVID-19 datasets Philipp Wegner, Geena Mariya Jose, Vanessa Lage-Rupprecht, Sepehr Golriz Khatami, Bide Zhang, Stephan Springstubbe, et al. (+7)
6 [GO] 2022―Aug―29 CovidGraph: A Graph to fight COVID-19 Lea Gütebier, Tim Bleimehl, Ron Henkel, Jamie Munro, Sebastian Müller, Axel Morgner, et al. (+11)
7 [GO] 2022―Jul―21 SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants Gabriel Cia, Jean Marc Kwasigroch, Marianne Rooman, Fabrizio Pucci, Pier Luigi Martelli
8 [GO] 2022―Jul―08 CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance Alice Wittig, Fábio Miranda, Martin Hölzer, Tom Altenburg, Jakub M Bartoszewicz, Sebastian Beyvers, et al. (+13)
9 [GO] 2022―Jun―30 Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus related antibodies Puneet Rawat, Divya Sharma, R Prabakaran, Fathima Ridha, Mugdha Mohkhedkar, Vani Janakiraman, et al. (+2)
10 [GO] 2022―Jun―22 matOptimize: A parallel tree optimization method enables online phylogenetics for SARS-CoV-2 Cheng Ye, Bryan Thornlow, Angie Hinrichs, Alexander Kramer, Cade Mirchandani, Devika Torvi, et al. (+4)
11 [GO] 2022―Jun―01 VOC-alarm: Mutation-based prediction of SARS-CoV-2 variants of concern Hongyu Zhao, Kun Han, Chao Gao, Vithal Madhira, Umit Topaloglu, Yong Lu, et al. (+2)
12 [GO] 2022―May―10 ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads Martin Hunt, Jeremy Swann, Bede Constantinides, Philip W Fowler, Zamin Iqbal, Can Alkan
13 [GO] 2022―Mar―24 EDGE COVID-19: A Web Platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts Chien-Chi Lo, Migun Shakya, Ryan Connor, Karen Davenport, Mark Flynn, Adán Myers y Gutiérrez, et al. (+6)
14 [GO] 2022―Mar―02 COVID-19 Spread Mapper: A multi-resolution, unified framework and open-source tool Andy Shi, Sheila M Gaynor, Rounak Dey, Haoyu Zhang, Corbin Quick, Xihong Lin, Jonathan Wren
15 [GO] 2022―Jan―13 ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time Luca Cilibrasi, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Matteo Chiara, Stefano Ceri, Jonathan Wren
16 [GO] 2021―Dec―13 InterARTIC: an interactive web application for whole-genome nanopore sequencing analysis of SARS-CoV-2 and other viruses James M Ferguson, Hasindu Gamaarachchi, Thanh Nguyen, Alyne Gollon, Stephanie Tong, Chiara Aquilina-Reid, et al. (+3)
17 [GO] 2021―Oct―06 COVID-19 knowledge graph from semantic integration of biomedical literature and databases Chuming Chen, Karen E Ross, Sachin Gavali, Julie E Cowart, Cathy H Wu, Zhiyong Lu
18 [GO] 2021―May―26 Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and greater coronavirus family Chen Wang, Daniel M Konecki, David C Marciano, Harikumar Govindarajan, Amanda M Williams, Brigitta Wastuwidyaningtyas, et al. (+4)
19 [GO] 2021―May―19 3DBionotes COVID-19 Edition Jose Ramon Macias, Ruben Sanchez-Garcia, Pablo Conesa, Erney Ramirez-Aportela, Marta Martinez Gonzalez, Carlos Wert-Carvajal, et al. (+7)
20 [GO] 2021―Feb―05 Differentially conserved amino acid positions may reflect differences in SARS-CoV-2 and SARS-CoV behaviour Denisa Bojkova, Jake E McGreig, Katie-May McLaughlin, Stuart G Masterson, Magdalena Antczak, Marek Widera, et al. (+6)
21 [GO] 2020―Nov―10 COVID-KOP: Integrating Emerging COVID-19 Data with the ROBOKOP Database Daniel Korn, Tesia Bobrowski, Michael Li, Yaphet Kebede, Patrick Wang, Phillips Owen, et al. (+6)
22 [GO] 2020―Mar―26 Potential covalent drugs targeting the main protease of the SARS-CoV-2 coronavirus Sen Liu, Qiang Zheng, Zhiying Wang, Arne Elofsson
23 [GO] 2020―Feb―25 Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes Sara Cleemput, Wim Dumon, Vagner Fonseca, Wasim Abdool Karim, Marta Giovanetti, Luiz Carlos Alcantara, et al. (+3)
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23 Results       Page 1


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