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original article |
Date |
Title |
Authors All Authors |
1 |
[GO] |
2023―Feb―07 |
Rapid Lineage Assignment of Severe Acute Respiratory Syndrome Coronavirus 2 Cases through Automated Library Preparation, Sequencing, and Bioinformatic Analysis |
Andrew J. Gorzalski, Heather Kerwin, Subhash Verma, David C. Hess, Joel Sevinsky, Kevin Libuit, et al. (+6) Irina Vlasova-St. Louis, Danielle Siao, Lauren Siao, Diego Bunuel, Stephanie Van Hooser, Mark W. Pandori |
2 |
[GO] |
2022―Jul―18 |
Clinical performance characteristics of the Swift Normalase Amplicon Panel for sensitive recovery of SARS-CoV-2 genomes |
Lasata Shrestha, Michelle J. Lin, Hong Xie, Margaret G. Mills, Shah A. Mohamed Bakhash, Vinod P. Gaur, et al. (+8) Robert J. Livingston, Jared Castor, Emily A. Bruce, Jason W. Botten, Meei-Li Huang, Keith R. Jerome, Alexander L. Greninger, Pavitra Roychoudhury |
3 |
[GO] |
2022―May―04 |
RT-PCR/MALDI-TOF diagnostic target performance reflects circulating SARS-CoV-2 variant diversity in New York City |
Matthew M. Hernandez, Radhika Banu, Ana S. Gonzalez-Reiche, Brandon Gray, Paras Shrestha, Liyong Cao, et al. (+14) Feng Chen, Huanzhi Shi, Ayman Hanna, Juan David Ramírez, Adriana van de Guchte, Robert Sebra, Melissa R. Gitman, Michael D. Nowak, Carlos Cordon-Cardo, Ted E. Schutzbank, Viviana Simon, Harm van Bakel, Emilia Mia Sordillo, Alberto E. Paniz-Mondolfi |
4 |
[GO] |
2022―Apr―27 |
Saliva vs upper respiratory swabs: Equivalent for SARS-CoV-2 university screening while saliva positivity is prolonged post-symptom onset in COVID-19 hospitalized patients |
Farah El-Sharkawy, Chi Ngong Tang, Ayannah S. Fitzgerald, Layla A. Khatib, Jevon Graham-Wooten, Laurel Glaser, et al. (+3) Ronald G. Collman, Vivianna M. Van Deerlin, Sarah E. Herlihy |
5 |
[GO] |
2022―Feb―24 |
A comparison of Seegene Technologies Novaplex SARS-CoV-2 Variants I, II, & IV assays with spike gene sequencing for detection of known SARS-CoV-2 variants |
Marisa C. Nielsen, Rafael R.G. Machado, Brooke M. Mitchell, Allan J. McConnell, Nehad I. Saada, Scott C. Weaver, Ping Ren |
6 |
[GO] |
2022―Feb―04 |
Development and Validation of Two RT-qPCR Diagnostic Assays for Detecting SARS-CoV-2 Genomic Targets Across Two Specimen Types. |
Eric W. Miller, Celeste M. Lamberson, Ratilal R. Akabari, Scott W. Riddell, Frank A. Middleton, Michel R. Nasr, et al. (+2) Scott C. Smith, Steven M. Sperber |
7 |
[GO] |
2022―Feb―03 |
COVID-19 Diagnosis in Low- and Middle-Income Countries: the big new bully disrupting TB and HIV diagnostic services |
Alaine Umubyeyi Nyaruhirira, Jerod N. Scholten, Mustapha Gidado, Pedro G. Suarez |
8 |
[GO] |
2022―Feb―02 |
RT-LAMP has high accuracy for detecting SARS-CoV-2 in saliva and naso/oropharyngeal swabs from asymptomatic and symptomatic individuals |
Stephen P. Kidd, Daniel Burns, Bryony Armson, Andrew D. Beggs, Emma L.A. Howson, Anthony Williams, et al. (+44) Gemma Snell, Emma L. Wise, Alice Goring, Zoe Vincent-Mistiaen, Seden Grippon, Jason Sawyer, Claire Cassar, David Cross, Thomas Lewis, Scott M. Reid, Samantha Rivers, Joe James, Paul Skinner, Ashley Banyard, Kerrie Davies, Anetta Ptasinska, Celina Whalley, Jack Ferguson, Claire Bryer, Charlie Poxon, Andrew Bosworth, Michael Kidd, Alex Richter, Jane Burton, Hannah Love, Sarah Fouch, Claire Tillyer, Amy Sowood, Helen Patrick, Nathan Moore, Michael Andreou, Nick Morant, Rebecca Houghton, Joe Parker, Joanne Slater-Jefferies, Ian Brown, Cosima Gretton, Zandra Deans, Deborah Porter, Nicholas J. Cortes, Angela Douglas, Sue L. Hill, Keith M. Godfrey, Veronica L. Fowler |
9 |
[GO] |
2022―Feb―02 |
Multiplex PCR Assays for Identifying All Major SARS-CoV-2 Variants |
Ryan J. Dikdan, Salvatore AE. Marras, Amanda P. Field, Alicia Brownlee, Alexander Cironi, D. Ashley Hill, Sanjay Tyagi |
10 |
[GO] |
2021―Dec―30 |
The Prognostic Value of an RT-PCR Test for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Is Contingent on Timing across Disease Time Course in addition to Assay Sensitivity |
Jeffrey P. Townsend, Chad R. Wells |
11 |
[GO] |
2021―Nov―23 |
SARS-CoV-2 RT-qPCR test detection rates are associated with patient age, sex, and time since diagnosis |
Matan Levine-Tiefenbrun, Idan Yelin, Hedva Uriel, Jacob Kuint, Licita Schreiber, Esma Herzel, et al. (+6) Rachel Katz, Amir Ben-Tov, Sivan Gazit, Tal Patalon, Gabriel Chodick, Roy Kishony |
12 |
[GO] |
2021―Sep―30 |
A magnetic modulation biosensing-based molecular assay for rapid and highly sensitive clinical diagnosis of COVID-19 |
Michael Margulis, Oran Erster, Shira Roth, Michal Mandelboim, Amos Danielli |
13 |
[GO] |
2021―Sep―29 |
Efficient detection of SARS-CoV-2 from exhaled breath. |
Chaorui Duan, Luke Buerer, Jing Wang, Samuel Kaplan, Gavin Sabalewski, Gregory D. Jay, et al. (+3) Sean Monaghan, Andrea E. Arena, William G. Fairbrother |
14 |
[GO] |
2021―Sep―23 |
Two-Stage Hierarchical Group Testing Strategy to Increase SARS-CoV-2 Testing Capacity at an Institution of Higher Education: A Retrospective Analysis |
Troy J. Ganz, Rachel Donner, Kevin M. Hines, Markus L. Waithe-Alleyne, Deirdre L. Slate, Gyorgy Abel, Jared R. Auclair |
15 |
[GO] |
2021―Sep―16 |
Temporary Regulatory Deviations and the Coronavirus Disease 2019 (COVID-19) PCR Labeling Update Study Indicate What Laboratory-Developed Test Regulation by the US Food and Drug Administration (FDA) Could Look Like |
Hetal D. Marble, Adam Z. Bard, Mark M. Mizrachi, Jochen K. Lennerz |
16 |
[GO] |
2021―Aug―25 |
Extraction-free rapid cycle RT-qPCR and extreme RT-PCR for SARS-CoV-2 virus detection |
Joseph C. Lownik, Grayson Way, Jared S. Farrar, Rebecca K. Martin |
17 |
[GO] |
2021―Aug―03 |
Evaluating diagnostic accuracy of saliva sampling methods for SARS-CoV-2 reveals differential sensitivity and association with viral load |
Pieter Mestdagh, Michel Gillard, Sharonjit K. Dhillon, Jean-Paul Pirnay, Jeroen Poels, Jan Hellemans, et al. (+11) Veronik Hutse, Celine Vermeiren, Maxime Boutier, Veerle De Wever, Patrick Soentjens, Sarah Djebara, Hugues Malonne, Emmanuel André, Marc Arbyn, John Smeraglia, Jo Vandesompele |
18 |
[GO] |
2021―Jun―18 |
SARS-CoV-2 genome sequencing from post-mortem formalin-fixed, paraffin-embedded lung tissues |
Claude Van Campenhout, Ricardo De Mendonça, Barbara Alexiou, Sarah De Clercq, Marie-Lucie Racu, Claire Royer-Chardon, et al. (+10) Stefan Rusu, Marie Van Eycken, Maria Artesi, Keith Durkin, Patrick Mardulyn, Vincent Bours, Christine Decaestecker, Myriam Remmelink, Isabelle Salmon, Nicky D’Haene |
19 |
[GO] |
2021―Jun―08 |
Prediction of false positive SARS-CoV-2 molecular results in a high-throughput open platform system |
Ryan John Martinez, Nathan Pankratz, Matthew Schomaker, Jerry Daniel, Kenneth Beckman, Amy Beth Karger, et al. (+4) Bharat Thyagarajan, Patricia Ferreri, Sophia Louise Yohe, Andrew Cook Nelson |
20 |
[GO] |
2021―Jun―05 |
Ct Values do not Predict SARS-CoV-2 Transmissibility in College Students |
Di Tian, Zhen Lin, Ellie M. Kriner, Dalton J. Esneault, Jonathan Tran, Julia C. DeVoto, et al. (+16) Naima Okami, Rachel Greenberg, Sarah Yanofsky, Swarnamala Ratnayaka, Nicholas Tran, Maeghan Livaccari, Marla Lampp, Noel Wang, Scott Tim, Patrick Norton, John Scott, Tony Y. Hu, Robert Garry, Lee Hamm, Patrice Delafontaine, Xiao-Ming Yin |
21 |
[GO] |
2021―May―29 |
SARS-CoV-2 RNA Quantification Using Droplet Digital RT-PCR |
Natalie N. Kinloch, Gordon Ritchie, Winnie Dong, Kyle D. Cobarrubias, Hanwei Sudderuddin, Tanya Lawson, et al. (+7) Nancy Matic, Julio S.G. Montaner, Victor Leung, Marc G. Romney, Christopher F. Lowe, Chanson J. Brumme, Zabrina L. Brumme |
22 |
[GO] |
2021―May―19 |
Real-life head-to-head comparison of performance of two high-throughput automated assays for detection of SARS-CoV-2 RNA in nasopharyngeal swabs: the Alinity m SARS-CoV-2 and cobas 6800 SARS-CoV-2 assays |
Rok Kogoj, Petra Kmetič, Anja Oštrbenk Valenčak, Kristina Fujs Komloš, Katja Seme, Martin Sagadin, et al. (+2) Miša Korva, Mario Poljak |
23 |
[GO] |
2021―May―05 |
A comparative study of real-time RT-PCR-based SARS-CoV-2 detection methods and its application to human-derived and surface swabbed material |
Aizhan Tastanova, Corinne Isabelle Stoffel, Andreas Dzung, Phil Fang Cheng, Elisa Bellini, Pål Johansen, et al. (+5) Agathe Duda, Stephan Nobbe, Reto Lienhard, Philipp Peter Bosshard, Mitchell Paul Levesque |
24 |
[GO] |
2021―May―04 |
SalivaAll: Clinical validation of a sensitive test for saliva collected in healthcare and community settings with pooling utility for SARS-CoV-2 mass surveillance. |
Nikhil S. Sahajpal, Ashis K. Mondal, Sudha Ananth, Allan Njau, Pankaj Ahluwalia, Vamsi Kota, et al. (+9) Kevin Caspary, Ted M. Ross, Michael Farrell, Michael P. Shannon, Sadanand Fulzele, Alka Chaubey, Madhuri Hegde, Amyn M. Rojiani, Ravindra Kolhe |
25 |
[GO] |
2021―Apr―14 |
Modifying a diagnostic SARS-CoV-2 Spike PCR to turn a Del69/70 drop-out into a discriminatory on-target assay |
Dominik Nörz, Susanne Pfefferle, Moritz Grunwald, Nicole Fischer, Martin Aepfelbacher, Marc Lütgehetmann |
26 |
[GO] |
2021―Mar―26 |
Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR |
Andreas Dzung, Phil Cheng, Corinne Stoffel, Aizhan Tastanova, Patrick Turko, Mitchell P. Levesque, Philipp P. Bosshard |
27 |
[GO] |
2021―Mar―10 |
Microchip RT-PCR Detection of Nasopharyngeal SARS-CoV-2 Samples |
Razvan Cojocaru, Iqra Yaseen, Peter J. Unrau, Christopher F. Lowe, Gordon Ritchie, Marc G. Romney, et al. (+3) Don D. Sin, Sikander Gill, Maxim Slyadnev |
28 |
[GO] |
2021―Mar―09 |
Sample-to-Answer and Routine Real-Time Reverse Transcription PCR (rRT-PCR): A Comparison of Different Platforms for SARS-CoV-2 Detection |
Donghua Wen, Simin Yang, Guangbo Li, Qiankun Xuan, Wenzheng Guo, Wenjuan Wu |
29 |
[GO] |
2021―Feb―05 |
A Non-Adaptive Combinatorial Group Testing Strategy to Facilitate Healthcare Worker Screening During the Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) Outbreak |
John H. McDermott, Duncan Stoddard, Peter J. Woolf, Jamie M. Ellingford, David Gokhale, Algy Taylor, et al. (+3) Leigh Demain, William G. Newman, Graeme Black |
30 |
[GO] |
2021―Jan―22 |
Comparison of two commercial platforms and a laboratory developed test for detection of SARS-CoV-2 RNA |
Laura Mannonen, Hannimari Kallio-Kokko, Raisa Loginov, Anu Jääskeläinen, Pia Jokela, Jenni Antikainen, et al. (+5) Paula Väre, Eliisa Kekäläinen, Satu Kurkela, Hanna Jarva, Maija Lappalainen |
31 |
[GO] |
2021―Jan―01 |
Relative Sensitivity of Saliva and Upper Airway Swabs for Initial Detection of SARS-CoV-2 in Ambulatory Patients: Rapid Review |
Timothy J. O’Leary |
32 |
[GO] |
2020―Dec―29 |
Comparison of seven commercial SARS-CoV-2 nucleic acid detection reagents with pseudovirus as quality control material |
Ying Yan, Le Chang, Wenxin Luo, Junyi Liu, Fei Guo, Lunan Wang |
33 |
[GO] |
2020―Dec―18 |
Diagnostics in the Time of Coronavirus Disease 2019 (COVID-19) |
Barbara Zehnbauer |
34 |
[GO] |
2020―Dec―05 |
Rapid implementation of SARS-CoV-2 emergency use authorization RT-PCR testing and experience at an academic medical institution |
Priya Velu, Arryn Craney, Phyllis Ruggiero, John Sipley, Lin Cong, Erika M. Hissong, et al. (+4) Massimo Loda, Lars F. Westblade, Melissa Cushing, Hanna Rennert |
35 |
[GO] |
2020―Dec―05 |
Performance Characteristics of SARS-CoV-2 PCR Tests in A Single Health System: Analysis of over 10,000 Results from Three Different Assays |
Travis K. Price, Brian C. Bowland, Sukantha Chandrasekaran, Omai B. Garner, Shangxin Yang |
36 |
[GO] |
2020―Nov―28 |
Comparison of 12 Molecular Detection Assays for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) |
Yasufumi Matsumura, Tsunehiro Shimizu, Taro Noguchi, Satoshi Nakano, Masaki Yamamoto, Miki Nagao |
37 |
[GO] |
2020―Nov―17 |
Performance of SARS-CoV-2 Real-time RT-PCR Tests on Oral Rinses and Saliva Samples |
N. Esther Babady, Tracy McMillen, Krupa Jani, Agnes Viale, Elizabeth V. Robilotti, Anoshe Aslam, et al. (+6) Maureen Diver, Desiree Sokoli, Greg Mason, Monika K. Shah, Deborah Korenstein, Mini Kamboj |
38 |
[GO] |
2020―Oct―26 |
Dynamics of Blood Viral Load is Strongly Associated with Clinical Outcomes in COVID-19 Patients: A Prospective Cohort Study |
Liting Chen, Gaoxiang Wang, Xiaolu Long, Hongyan Hou, Jia Wei, Yang Cao, et al. (+11) Jiaqi Tan, Weiyong Liu, Liang Huang, Fankai Meng, Lifang Huang, Na Wang, Jianping Zhao, Gang Huang, Ziyong Sun, Wei Wang, Jianfeng Zhou |
39 |
[GO] |
2020―Oct―26 |
External Quality Assessment for Molecular Detection of Severe Acute Respiratory Syndrome Coronavirus 2 in Clinical laboratories |
Zhe Wang, Yuqing Chen, Jing Yang, Yanxi Han, Jiping Shi, Shaohua Zhan, et al. (+5) Rongxue Peng, Rui Li, Runling Zhang, Jinming Li, Rui Zhang |
40 |
[GO] |
2020―Sep―19 |
Development of a New Multiplex Real Time RT-PCR Assay for SARS-CoV-2 Detection |
Wei Zhen, Gregory J. Berry |
41 |
[GO] |
2020―Jul―30 |
Proposal of Reverse Transcription-PCR-Based Mass Population Screening for SARS-CoV-2 (COVID-19) |
Nikhil Shri Sahajpal, Ashis K. Mondal, Allan Njau, Sudha Ananth, Kimya Jones, Pankaj K. Ahluwalia, et al. (+7) Meenakshi Ahluwalia, Yasmeen Jilani, Alka Chaubey, Madhuri Hegde, Vamsi Kota, Amyn Rojiani, Ravindra Kolhe |
42 |
[GO] |
2020―Jun―19 |
Responding to the Challenges of SARS-CoV-2: Perspectives from the Association for Molecular Pathology (AMP) Infectious Disease Subdivision Leadership |
Frederick S. Nolte, N. Esther Babady, Blake W. Buchan, Gerald A. Capraro, Erin H. Graf, Amy L. Leber, et al. (+2) Erin McElvania, Joseph D.C. Yao |
43 |
[GO] |
2020―May―16 |
Laboratories and pandemic preparedness: A framework for collaboration and oversight |
Karen L. Kaul |
44 |
[GO] |
2020―May―13 |
Detection of SARS-CoV-2 is comparable in clinical samples preserved in saline or viral transport media |
Jared Radbel, Sugeet Jagpal, Jason Roy, Andrew Brooks, Jay Tischfield, Michael Sheldon, et al. (+8) Christian Bixby, Dana Witt, Maria Laura Gennaro, Daniel B. Horton, Emily S. Barrett, Jeffrey L. Carson, Reynold A. Panettieri, Martin J. Blaser |
45 |
[GO] |
2020―Apr―07 |
Development of Reverse Transcription Loop-Mediated Isothermal Amplification Assays Targeting SARS-CoV-2 |
Gun-Soo Park, Keunbon Ku, Seung-Hwa Baek, Seong-Jun Kim, Seung Il Kim, Bum-Tae Kim, Jin-Soo Maeng |
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