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original article |
Date |
Title |
Authors All Authors |
1 |
[GO] |
2025―Jan―29 |
Mechanistic models of humoral kinetics following COVID-19 vaccination |
Daniel Stocks, Amy Thomas, Adam Finn, Leon Danon, Ellen Brooks-Pollock |
2 |
[GO] |
2025―Jan―08 |
State-space modelling using wastewater virus and epidemiological data to estimate reported COVID-19 cases and the potential infection numbers |
Syun-suke Kadoya, Yubing Li, Yilei Wang, Hiroyuki Katayama, Daisuke Sano |
3 |
[GO] |
2024―Dec―11 |
Uncertainty in COVID-19 transmission could undermine our ability to predict long COVID |
Alexander B. Beams, David J. D. Earn, Caroline Colijn |
4 |
[GO] |
2024―Nov―27 |
Within-host dynamics of antiviral treatment with remdesivir for SARS-CoV-2 infection |
Lea Schuh, Peter V. Markov, Ioanna Voulgaridi, Zacharoula Bogogiannidou, Varvara A. Mouchtouri, Christos Hadjichristodoulou, Nikolaos I. Stilianakis |
5 |
[GO] |
2024―Jul―31 |
Culture and effectiveness of distance restriction policies: evidence from the COVID-19 pandemic |
Yang Xu, Chen Dong, Wenjing Shao |
6 |
[GO] |
2024―Mar―06 |
A Bayesian approach to identifying the role of hospital structure and staff interactions in nosocomial transmission of SARS-CoV-2 |
Jessica R. E. Bridgen, Joseph M. Lewis, Stacy Todd, Miriam Taegtmeyer, Jonathan M. Read, Chris P. Jewell |
7 |
[GO] |
2024―Feb―07 |
Predicting potential SARS-CoV-2 mutations of concern via full quantum mechanical modelling |
Marco Zaccaria, Luigi Genovese, Brigitte E. Lawhorn, William Dawson, Andrew S. Joyal, Jingqing Hu, et al. (+6) Patrick Autissier, Takahito Nakajima, Welkin E. Johnson, Ismael Fofana, Michael Farzan, Babak Momeni |
8 |
[GO] |
2023―Dec―13 |
COVID-19 spreading patterns in family clusters reveal gender roles in China |
Jingyi Liao, Xiao Fan Liu, Xiao-Ke Xu, Tao Zhou |
9 |
[GO] |
2023―Nov―15 |
Spatio-temporal surveillance and early detection of SARS-CoV-2 variants of concern: a retrospective analysis |
Massimo Cavallaro, Louise Dyson, Michael J. Tildesley, Dan Todkill, Matt J. Keeling |
10 |
[GO] |
2023―Sep―13 |
Off-label drug use during the COVID-19 pandemic in Africa: topic modelling and sentiment analysis of ivermectin in South Africa and Nigeria as a case study |
Z. Movahedi Nia, N. L. Bragazzi, A. Ahamadi, A. Asgary, B. Mellado, J. Orbinski, et al. (+4) L. Seyyed-Kalantari, W. A. Woldegerima, J. Wu, J. D. Kong |
11 |
[GO] |
2023―Aug―29 |
Medium-term scenarios of COVID-19 as a function of immune uncertainties and chronic disease |
Chadi M. Saad-Roy, Sinead E. Morris, Rachel E. Baker, Jeremy Farrar, Andrea L. Graham, Simon A. Levin, et al. (+3) Caroline E. Wagner, C. Jessica. E. Metcalf, Bryan T. Grenfell |
12 |
[GO] |
2023―Aug―09 |
Modelling the viral dynamics of the SARS-CoV-2 Delta and Omicron variants in different cell types |
Clare P. McCormack, Ada W. C. Yan, Jonathan C. Brown, Ksenia Sukhova, Thomas P. Peacock, Wendy S. Barclay, Ilaria Dorigatti |
13 |
[GO] |
2023―Jun―21 |
Differences in airborne stability of SARS-CoV-2 variants of concern is impacted by alkalinity of surrogates of respiratory aerosol |
Allen Haddrell, Mara Otero-Fernandez, Henry Oswin, Tristan Cogan, James Bazire, Jianghan Tian, et al. (+6) Robert Alexander, Jamie F. S. Mann, Darryl Hill, Adam Finn, Andrew D. Davidson, Jonathan P. Reid |
14 |
[GO] |
2022―Nov―16 |
Associations between indoor relative humidity and global COVID-19 outcomes |
C. A. Verheyen, L. Bourouiba |
15 |
[GO] |
2022―Oct―12 |
Assessing the asymptomatic proportion of SARS-CoV-2 infection with age in China before mass vaccination |
Zengmiao Wang, Peiyi Wu, Jingyuan Wang, José Lourenço, Bingying Li, Benjamin Rader, et al. (+9) Marko Laine, Hui Miao, Ligui Wang, Hongbin Song, Nita Bharti, John S. Brownstein, Ottar N. Bjornstad, Christopher Dye, Huaiyu Tian |
16 |
[GO] |
2022―Sep―06 |
The role of booster vaccination and ongoing viral evolution in seasonal circulation of SARS-CoV-2 |
A. N. M. Kraay, M. E. Gallagher, Y. Ge, P. Han, J. M. Baker, K. Koelle, et al. (+2) A. Handel, B. A. Lopman |
17 |
[GO] |
2022―Aug―31 |
The role of inter-regional mobility in forecasting SARS-CoV-2 transmission |
Martijn H. H. Schoot Uiterkamp, Martijn Gösgens, Hans Heesterbeek, Remco van der Hofstad, Nelly Litvak |
18 |
[GO] |
2022―Jun―15 |
The importance of the generation interval in investigating dynamics and control of new SARS-CoV-2 variants |
Sang Woo Park, Benjamin M. Bolker, Sebastian Funk, C. Jessica E. Metcalf, Joshua S. Weitz, Bryan T. Grenfell, Jonathan Dushoff |
19 |
[GO] |
2022―Jun―06 |
COVID-19 pandemic dynamics in India, the SARS-CoV-2 Delta variant and implications for vaccination |
Wan Yang, Jeffrey Shaman |
20 |
[GO] |
2022―May―25 |
Impacts of a delayed and slow-paced vaccination on cases and deaths during the COVID-19 pandemic: a modelling study |
Gustavo Barbosa Libotte, Lucas dos Anjos, Regina Célia Cerqueira de Almeida, Sandra Mara Cardoso Malta, Roberto de Andrade Medronho |
21 |
[GO] |
2022―May―04 |
Face masking and COVID-19: potential effects of variolation on transmission dynamics |
Zachary Levine, David J. D. Earn |
22 |
[GO] |
2022―Mar―14 |
Estimating data-driven coronavirus disease 2019 mitigation strategies for safe university reopening |
Qihui Yang, Don M. Gruenbacher, Caterina M. Scoglio |
23 |
[GO] |
2022―Mar―09 |
Optimal COVID-19 lockdown strategies in an age-structured SEIR model of Northern Ireland |
Gavin M. Abernethy, David H. Glass |
24 |
[GO] |
2022―Feb―16 |
The spatial dissemination of COVID-19 and associated socio-economic consequences |
Yafei Zhang, Lin Wang, Jonathan J. H. Zhu, Xiaofan Wang |
25 |
[GO] |
2022―Feb―16 |
A semi-parametric, state-space compartmental model with time-dependent parameters for forecasting COVID-19 cases, hospitalizations and deaths |
Eamon B. O’Dea, John M. Drake |
26 |
[GO] |
2021―Dec―15 |
Deciphering early-warning signals of SARS-CoV-2 elimination and resurgence from limited data at multiple scales |
Kris V. Parag, Benjamin J. Cowling, Christl A. Donnelly |
27 |
[GO] |
2021―Sep―29 |
Which features of an outpatient treatment for COVID-19 would be most important for pandemic control? A modelling study |
Jean-Philippe Lanoix, Youcef Mammeri, Jean-Luc Schmit, Michel Lefranc |
28 |
[GO] |
2021―Sep―01 |
Comparison between one and two dose SARS-CoV-2 vaccine prioritization for a fixed number of vaccine doses |
Edward M. Hill, Matt J. Keeling |
29 |
[GO] |
2021―Aug―25 |
A data driven agent-based model that recommends non-pharmaceutical interventions to suppress Coronavirus disease 2019 resurgence in megacities |
Ling Yin, Hao Zhang, Yuan Li, Kang Liu, Tianmu Chen, Wei Luo, et al. (+10) Shengjie Lai, Ye Li, Xiujuan Tang, Li Ning, Shengzhong Feng, Yanjie Wei, Zhiyuan Zhao, Ying Wen, Liang Mao, Shujiang Mei |
30 |
[GO] |
2021―Aug―03 |
A multi-layer model for the early detection of COVID-19 |
Erez Shmueli, Ronen Mansuri, Matan Porcilan, Tamar Amir, Lior Yosha, Matan Yechezkel, et al. (+4) Tal Patalon, Sharon Handelman-Gotlib, Sivan Gazit, Dan Yamin |
31 |
[GO] |
2021―Aug―03 |
Socio-economic determinants of mobility responses during the first wave of COVID-19 in Italy: from provinces to neighbourhoods |
Laetitia Gauvin, Paolo Bajardi, Emanuele Pepe, Brennan Lake, Filippo Privitera, Michele Tizzoni |
32 |
[GO] |
2021―Jul―20 |
SARS-CoV-2 screening: effectiveness and risk of increasing transmission |
Jordan P. Skittrall |
33 |
[GO] |
2021―Jun―15 |
Efficient and effective single-step screening of individual samples for SARS-CoV-2 RNA using multi-dimensional pooling and Bayesian inference |
Juliana Sobczyk, Michael T. Pyne, Adam Barker, Jeanmarie Mayer, Kimberly E. Hanson, Matthew H. Samore, Rodrigo Noriega |
34 |
[GO] |
2021―Jun―01 |
Differential effects of COVID-19 lockdowns on well-being: interaction between age, gender and chronotype |
Shay Oved, Merav Mofaz, Anat Lan, Haim Einat, Noga Kronfeld-Schor, Dan Yamin, Erez Shmueli |
35 |
[GO] |
2021―May―19 |
Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study |
Francesca A. Lovell-Read, Sebastian Funk, Uri Obolski, Christl A. Donnelly, Robin N. Thompson |
36 |
[GO] |
2021―May―05 |
Effect of manual and digital contact tracing on COVID-19 outbreaks: a study on empirical contact data |
A. Barrat, C. Cattuto, M. Kivelä, S. Lehmann, J. Saramäki |
37 |
[GO] |
2021―Apr―28 |
Modelling the impact of household size distribution on the transmission dynamics of COVID-19 |
Pengyu Liu, Lisa McQuarrie, Yexuan Song, Caroline Colijn |
38 |
[GO] |
2021―Apr―20 |
Managing the risk of a COVID-19 outbreak from border arrivals |
Nicholas Steyn, Michael J. Plank, Alex James, Rachelle N. Binny, Shaun C. Hendy, Audrey Lustig |
39 |
[GO] |
2021―Apr―20 |
Time variation in the probability of failing to detect a case of polymerase chain reaction testing for SARS-CoV-2 as estimated from a viral dynamics model |
Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Yasuhisa Fujita, Ming Li, Roger S. Zoh, et al. (+4) Kazuyuki Aihara, Taiga Miyazaki, Takaji Wakita, Shingo Iwami |
40 |
[GO] |
2021―Apr―14 |
School closures reduced social mixing of children during COVID-19 with implications for transmission risk and school reopening policies |
Jennifer R. Head, Kristin L. Andrejko, Qu Cheng, Philip A. Collender, Sophie Phillips, Anna Boser, et al. (+8) Alexandra K. Heaney, Christopher M. Hoover, Sean L. Wu, Graham R. Northrup, Karen Click, Naomi S. Bardach, Joseph A. Lewnard, Justin V. Remais |
41 |
[GO] |
2021―Mar―31 |
COVID-19 policy analysis: labour structure dictates lockdown mobility behaviour |
Samuel Heroy, Isabella Loaiza, Alex Pentland, Neave O’Clery |
42 |
[GO] |
2021―Mar―31 |
Role of high-dose exposure in transmission hot zones as a driver of SARS-CoV-2 dynamics |
Dominik Wodarz, Natalia L. Komarova, Luis M. Schang |
43 |
[GO] |
2021―Mar―17 |
COVID-19 hospitalization rates rise exponentially with age, inversely proportional to thymic T-cell production |
Sam Palmer, Nik Cunniffe, Ruairí Donnelly |
44 |
[GO] |
2021―Feb―24 |
Automated contact tracing: a game of big numbers in the time of COVID-19 |
Hyunju Kim, Ayan Paul |
45 |
[GO] |
2021―Feb―24 |
Trade-offs between mobility restrictions and transmission of SARS-CoV-2 |
Martijn Gösgens, Teun Hendriks, Marko Boon, Wim Steenbakkers, Hans Heesterbeek, Remco van der Hofstad, Nelly Litvak |
46 |
[GO] |
2021―Feb―23 |
Effectiveness of non-pharmaceutical interventions to contain COVID-19: a case study of the 2020 spring pandemic wave in New York City |
Wan Yang, Jaimie Shaff, Jeffrey Shaman |
47 |
[GO] |
2021―Feb―17 |
Infection, inflammation and intervention: mechanistic modelling of epithelial cells in COVID-19 |
Nabil T. Fadai, Rahil Sachak-Patwa, Helen M. Byrne, Philip K. Maini, Mona Bafadhel, Dan V. Nicolau |
48 |
[GO] |
2021―Feb―10 |
Modelling and predicting the effect of social distancing and travel restrictions on COVID-19 spreading |
Francesco Parino, Lorenzo Zino, Maurizio Porfiri, Alessandro Rizzo |
49 |
[GO] |
2021―Feb―03 |
Trajectory of individual immunity and vaccination required for SARS-CoV-2 community immunity: a conceptual investigation |
Chadi M. Saad-Roy, Simon A. Levin, C. Jessica E. Metcalf, Bryan T. Grenfell |
50 |
[GO] |
2021―Jan―27 |
Diffusion segregation and the disproportionate incidence of COVID-19 in African American communities |
Aleix Bassolas, Sandro Sousa, Vincenzo Nicosia |
51 |
[GO] |
2021―Jan―27 |
The benefits of peer transparency in safe workplace operation post pandemic lockdown |
Arkady Wey, Alan Champneys, Rosemary J. Dyson, Nisreen A. Alwan, Mary Barker |
52 |
[GO] |
2021―Jan―20 |
Spread of COVID-19 in urban neighbourhoods and slums of the developing world |
Anand Sahasranaman, Henrik Jeldtoft Jensen |
53 |
[GO] |
2021―Jan―06 |
Risk mapping for COVID-19 outbreaks in Australia using mobility data |
Cameron Zachreson, Lewis Mitchell, Michael J. Lydeamore, Nicolas Rebuli, Martin Tomko, Nicholas Geard |
54 |
[GO] |
2021―Jan―06 |
Surface interactions and viability of coronaviruses |
Mehmet Onur Aydogdu, Esra Altun, Etelka Chung, Guogang Ren, Shervanthi Homer-Vanniasinkam, Biqiong Chen, Mohan Edirisinghe |
55 |
[GO] |
2021―Jan―06 |
Computational analysis of dynamic allostery and control in the SARS-CoV-2 main protease |
Igors Dubanevics, Tom C. B. McLeish |
56 |
[GO] |
2020―Dec―16 |
Mobile device location data reveal human mobility response to state-level stay-at-home orders during the COVID-19 pandemic in the USA |
Chenfeng Xiong, Songhua Hu, Mofeng Yang, Hannah Younes, Weiyu Luo, Sepehr Ghader, Lei Zhang |
57 |
[GO] |
2020―Nov―25 |
Inference of COVID-19 epidemiological distributions from Brazilian hospital data |
Iwona Hawryluk, Thomas A. Mellan, Henrique Hoeltgebaum, Swapnil Mishra, Ricardo P. Schnekenberg, Charles Whittaker, et al. (+5) Harrison Zhu, Axel Gandy, Christl A. Donnelly, Seth Flaxman, Samir Bhatt |
58 |
[GO] |
2020―Sep―30 |
Patterns of the COVID-19 pandemic spread around the world: exponential versus power laws |
Natalia L. Komarova, Luis M. Schang, Dominik Wodarz |
59 |
[GO] |
2020―Aug―05 |
Mathematical models and deep learning for predicting the number of individuals reported to be infected with SARS-CoV-2 |
A. S. Fokas, N. Dikaios, G. A. Kastis |
60 |
[GO] |
2020―Jul―22 |
Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak |
Sang Woo Park, Benjamin M. Bolker, David Champredon, David J. D. Earn, Michael Li, Joshua S. Weitz, et al. (+2) Bryan T. Grenfell, Jonathan Dushoff |
61 |
[GO] |
2020―Mar―18 |
Symbolic transfer entropy reveals the age structure of pandemic influenza transmission from high-volume influenza-like illness data |
Stephen M. Kissler, Cécile Viboud, Bryan T. Grenfell, Julia R. Gog |
62 |
[GO] |
2020―Mar―04 |
Population implications of the deployment of novel universal vaccines against epidemic and pandemic influenza |
N. Arinaminpathy, S. Riley, W. S. Barclay, C. Saad-Roy, B. Grenfell |