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COVID answers in Scientific Journals all over the world

Publishing House: Cold Spring Harbor Laboratory

30 Results       Page 1

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  original article Journal Date Title Authors All Authors
1 [GO] RNA 2024―Jul―31 Abolished frameshifting for predicted structure-stabilizing SARS-CoV-2 mutants: Implications to alternative conformations and their statistical structural analyses Abhishek Dey, Shuting Yan, Tamar Schlick, Alain Laederach
2 [GO] RNA 2024―Jun―28 Adenosine modifications impede SARS-CoV-2 RNA-dependent RNA transcription Laura R Snyder, Ingrid Kilde, Artem Nemudryi, Blake Wiedenheft, Markos Koutmos, Kristin S Koutmou
3 [GO] RNA 2024―Apr―02 NMR characterization and ligand binding site of the stem loop 2 motif (s2m) from the Delta variant of SARS-CoV-2 Tobias Matzel, Maria Wirtz Martin, Alexander Herr, Anna Wacker, Christian Richter, Sridhar Sreeramulu, Harald Schwalbe
4 [GO] RNA 2023―Oct―30 Motifs in SARS-CoV-2 evolution Christopher L. Barrett, Andrei C. Bura, Qijun He, Fenix W. Huang, Thomas J.X. Li, Christian M. Reidys
5 [GO] Genes & Development 2023―Oct―11 In vitro reconstitution of SARS-CoV-2 Nsp1-induced mRNA cleavage reveals the key roles of the N-terminal domain of Nsp1 and the RRM domain of eIF3g Irina S. Abaeva, Yani Arhab, Anna Miścicka, Christopher U.T. Hellen, Tatyana V. Pestova
6 [GO] RNA 2023―Aug―21 Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p Caylee L Cunningham, Caleb J Frye, Joseph A Makowski, Adam H Kensinger, Morgan Shine, Ella J Milback, et al. (+3)
7 [GO] Genome Research 2023―Mar―09 Global loss of cellular m6A RNA methylation following infection with different SARS-CoV-2 variants Roshan Vaid, Akram Mendez, Ketan Thombare, Rebeca Burgos Panadero, Rémy Robinot, Barbara F Fonseca, et al. (+9)
8 [GO] RNA 2023―Mar―08 No evidence for epitranscriptomic m5C modification of SARS-CoV-2, HIV and MLV viral RNA Anming Huang, Lydia Riepler, Dietmar Rieder, Janine Kimpel, Alexandra Lusser
9 [GO] Molecular Case Studies 2022―Jul―13 Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference J. Maximilian Fels, Saad Khan, Ryan Forster, Karin A Skalina, Surksha Sirichand, Amy S Fox, et al. (+18)
10 [GO] Cold Spring Harbor Perspectives in Medicine 2022―May―23 Endothelialitis, Microischemia, and Intussusceptive Angiogenesis in COVID-19 Steven J. Mentzer, Maximilian Ackermann, Danny Jonigk
11 [GO] Cold Spring Harbor Perspectives in Medicine 2022―May―06 The Evolution and Biology of SARS-CoV-2 Variants Amalio Telenti, Emma B. Hodcroft, David L. Robertson
12 [GO] RNA 2022―May―04 Rampant C-to-U deamination accounts for the intrinsically high mutation rate in SARS-CoV-2 spike gene Xueyan Liu, Xuan Liu, Jie Zhou, Yu Dong, Wen Jiang, Wenqing Jiang
13 [GO] RNA 2022―Mar―02 Correlated sequence signatures are present within the genomic 5’UTR RNA and NSP1 protein in coronaviruses Piotr Sosnowski, Antonin Tidu, Gilbert Eriani, Eric Westhof, Franck Martin
14 [GO] RNA 2022―Mar―01 The key features of SARS-CoV-2 leader and NSP1 required for viral escape of NSP1-mediated repression Lucija Bujanic, Olga Shevchuk, Nicolai von Kügelgen, Anna Kalinina, Katarzyna Ludwik, David Koppstein, et al. (+3)
15 [GO] Genome Research 2022―Jan―21 Plasma cell-free RNA characteristics in COVID-19 patients Yanqun Wang, Jie Li, Lu Zhang, Hai-Xi Sun, Zhaoyong Zhang, Jinjin Xu, et al. (+35)
16 [GO] RNA 2021―Dec―22 sgDI-tector: defective interfering viral genome bioinformatics for detection of coronavirus subgenomic RNAs Andrea Di Gioacchino, Rachel Legendre, Yannis Rahou, Valérie Najburg, Pierre Charneau, Benjamin D Greenbaum, et al. (+4)
17 [GO] RNA 2021―Nov―29 Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot Christopher P Jones, Adrian R Ferre-D'Amare
18 [GO] RNA 2021―Jul―27 SARS-CoV-2 infection triggers widespread host mRNA decay leading to an mRNA export block James M. Burke, Laura A. St Clair, Rushika Perera, Roy Parker
19 [GO] Genes & Development 2021―Jun―24 Targeting the m6A RNA modification pathway blocks SARS-CoV-2 and HCoV-OC43 replication Hannah M. Burgess, Daniel P. Depledge, Letitia Thompson, Kalanghad Puthankalam Srinivas, Rebecca C. Grande, Elizabeth I. Vink, et al. (+8)
20 [GO] RNA 2021―Jun―14 Genes with 5' terminal oligopyrimidine tracts preferentially escape global suppression of translation by the SARS-CoV-2 NSP1 protein Shilpa Rao, Ian Hoskins, Tori Tonn, Daniela Garcia, Hakan Ozadam, Elif Sarinay Cenik, Can Cenik
21 [GO] Genome Research 2021―Mar―15 Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data Matthew D. Parker, Benjamin B. Lindsey, Shay Leary, Silvana Gaudieri, Abha Chopra, Matthew Wyles, et al. (+27)
22 [GO] Genome Research 2021―Feb―18 Hidden genomic diversity of SARS-CoV-2: implications for qRT-PCR diagnostics and transmission Nicolae Sapoval, Medhat Mahmoud, Michael Jochum, Yunxi Liu, R.A. Leo Elworth, Qi Wang, et al. (+14)
23 [GO] Molecular Case Studies 2021―Feb―16 The Gut Microbiome: A Missing Link in Understanding the Gastrointestinal manifestations of COVID-19? Erin Brooks, Ami S Bhatt
24 [GO] RNA 2020―Dec―02 The viral protein NSP1 acts as a ribosome gatekeeper for shutting down host translation and fostering SARS-CoV-2 translation Antonin TIDU, Aurelie JANVIER, Laure SCHAEFFER, Piotr SOSNOWSKI, Lauriane KUHN, Philippe HAMMANN, et al. (+3)
25 [GO] Genome Research 2020―Oct―22 Sequencing identifies multiple early introductions of SARS-CoV-2 to the New York City Region Matthew T Maurano, Sitharam Ramaswami, Paul Zappile, Dacia Dimartino, Ludovic Boytard, André M. Ribeiro-dos-Santos, et al. (+39)
26 [GO] RNA 2020―Sep―28 Physiologic RNA Targets and Refined Sequence Specificity of Coronavirus EndoU Rachel Ancar, Yize Li, Eveline Kindler, Daphne A. Cooper, Monica Ransom, Volker Thiel, et al. (+3)
27 [GO] Genome Research 2020―Sep―02 Mapping genome variation of SARS-CoV-2 worldwide highlights the impact of COVID-19 super-spreaders Alberto Gomez-Carballa, Xabi Bello, Jacobo Pardo-Seco, Federico Martinon-Torres, Antonio Salas
28 [GO] RNA 2020―May―12 RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look Ramya Rangan, Ivan N Zheludev, Rhiju Das
29 [GO] RNA 2020―May―02 Overcoming the bottleneck to widespread testing: A rapid review of nucleic acid testing approaches for COVID-19 detection Meagan N Esbin, Oscar N Whitney, Shasha Chong, Anna Maurer, Xavier Darzacq, Robert Tjian
30 [GO] Cold Spring Harbor Perspectives in Medicine 2019―Dec―24 The 1918 Influenza Pandemic and Its Legacy Jeffery K. Taubenberger, David M. Morens
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30 Results       Page 1



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