|
original article |
Journal |
Date |
Title |
Authors All Authors |
1 |
[GO] |
eLife |
2022―Jun―21 |
Projected resurgence of COVID-19 in the United States in July-December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination |
Shaun Truelove, Claire P Smith, Michelle Qin, Luke C Mullany, Rebecca K Borchering, Justin Lessler, et al. (+54) Katriona Shea, Emily Howerton, Lucie Contamin, John Levander, Jessica Kerr, Harry Hochheiser, Matt Kinsey, Kate Tallaksen, Shelby Wilson, Lauren Shin, Kaitlin Rainwater-Lovett, Joseph C Lemairtre, Juan Dent, Joshua Kaminsky, Elizabeth C Lee, Javier Perez-Saez, Alison Hill, Dean Karlen, Matteo Chinazzi, Jessica T Davis, Kunpeng Mu, Xinyue Xiong, Ana Pastore y Piontti, Alessandro Vespignani, Ajitesh Srivastava, Przemyslaw Porebski, Srinivasan Venkatramanan, Aniruddha Adiga, Bryan Lewis, Brian Klahn, Joseph Outten, Mark Orr, Galen Harrison, Benjamin Hurt, Jiangzhuo Chen, Anil Vullikanti, Madhav Marathe, Stefan Hoops, Parantapa Bhattacharya, Dustin Machi, Shi Chen, Rajib Paul, Daniel Janies, Jean-Claude Thill, Marta Galanti, Teresa K Yamana, Sen Pei, Jeffrey L Shaman, Jessica M Healy, Rachel B Slayton, Matthew Biggerstaff, Michael A Johansson, Michael C Runge, Cecile Viboud |
2 |
[GO] |
eLife |
2022―Jun―20 |
Comprehensive fitness landscape of SARS-CoV-2 Mpro reveals insights into viral resistance mechanisms |
Julia M Flynn, Neha Samant, Gily Schneider-Nachum, David T Bakan, Nese Kurt Yilmaz, Celia A Schiffer, et al. (+3) Stephanie A Moquin, Dustin Dovala, Daniel NA Bolon |
3 |
[GO] |
eLife |
2022―Jun―14 |
Transmission networks of SARS-CoV-2 in Coastal Kenya during the first two waves: a retrospective genomic study |
Charles N Agoti, Lynette Isabella Ochola-Oyier, Simon Dellicour, Khadija Said Mohammed, Arnold W Lambisia, Zaydah R de Laurent, et al. (+30) John M Morobe, Maureen W Mburu, Donwilliams O Omuoyo, Edidah M Ongera, Leonard Ndwiga, Eric Maitha, Benson Kitole, Thani Suleiman, Mohamed Mwakinangu, John K Nyambu, John Otieno, Barke Salim, Jennifer Musyoki, Nickson Murunga, Edward Otieno, John N Kiiru, Kadondi Kasera, Patrick Amoth, Mercy Mwangangi, Rashid Aman, Samson Kinyanjui, George Warimwe, My Phan, Ambrose Agweyu, Matthew Cotten, Edwine Barasa, Benjamin Tsofa, D James Nokes, Philip Bejon, George Githinji |
4 |
[GO] |
eLife |
2022―Jun―10 |
Impact of the COVID-19 pandemic on breast cancer screening indicators in a Spanish population-based program: a cohort study |
Guillermo Bosch, Margarita Posso, Javier Louro, Marta Roman, Miquel Porta, Xavier Castells, Francesc Macià |
5 |
[GO] |
eLife |
2022―Jun―06 |
Efferocytosis of SARS-CoV-2-infected dying cells impairs macrophage anti-inflammatory functions and clearance of apoptotic cells |
Ana CG Salina, Douglas dos-Santos, Tamara S Rodrigues, Marlon Fortes-Rocha, Edismauro G Freitas-Filho, Daniel L Alzamora-Terrel, et al. (+37) Icaro MS Castro, Thais FC Fraga da Silva, Mikhael HF de Lima, Daniele C Nascimento, Camila M Silva, Juliana E Toller-Kawahisa, Amanda Becerra, Samuel Oliveira, Diego B Caetité, Leticia Almeida, Adriene Y Ishimoto, Thais M Lima, Ronaldo B Martins, Flavio Veras, Natália B do Amaral, Marcela C Giannini, Letícia P Bonjorno, Maria IF Lopes, Maira N Benatti, Sabrina S Batah, Rodrigo C Santana, Fernando C Vilar, Maria A Martins, Rodrigo L Assad, Sergio CL de Almeida, Fabiola R de Oliveira, Eurico Arruda Neto, Thiago M Cunha, José C Alves-Filho, Vania LD Bonato, Fernando Q Cunha, Alexandre T Fabro, Helder I Nakaya, Dario S Zamboni, Paulo Louzada-Junior, Rene DR Oliveira, Larissa D Cunha |
6 |
[GO] |
eLife |
2022―May―19 |
Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants |
François Blanquart, Nathanaël Hozé, Benjamin John Cowling, Florence Débarre, Simon Cauchemez |
7 |
[GO] |
eLife |
2022―May―19 |
SARS-CoV-2 host-shutoff impacts innate NK cell functions, but antibody-dependent NK activity is strongly activated through non-spike antibodies |
Ceri Alan Fielding, Pragati Sabberwal, James C Williamson, Edward JD Greenwood, Thomas WM Crozier, Wioleta Zelek, et al. (+15) Jeffrey Seow, Carl Graham, Isabella Huettner, Jonathan D Edgeworth, David A Price, B Paul Morgan, Kristin Ladell, Matthias Eberl, Ian R Humphreys, Blair Merrick, Katie Doores, Sam J Wilson, Paul J Lehner, Eddie CY Wang, Richard J Stanton |
8 |
[GO] |
eLife |
2022―May―17 |
Development and evaluation of a machine learning-based in-hospital COVID-19 disease outcome predictor (CODOP): A multicontinental retrospective study |
Riku Klén, Disha Purohit, Ricardo Gómez-Huelgas, José Manuel Casas-Rojo, Juan Miguel Antón-Santos, Jesús Millán Núñez-Cortés, et al. (+22) Carlos Lumbreras, José Manuel Ramos-Rincón, Noelia García Barrio, Miguel Pedrera-Jiménez, Antonio Lalueza Blanco, María Dolores Martin-Escalante, Francisco Rivas-Ruiz, Maria Ángeles Onieva-García, Pablo Young, Juan Ignacio Ramirez, Estela Edith Titto Omonte, Rosmery Gross Artega, Magdy Teresa Canales Beltrán, Pascual Ruben Valdez, Florencia Pugliese, Rosa Castagna, Ivan A Huespe, Bruno Boietti, Javier A Pollan, Nico Funke, Benjamin Leiding, David Gómez-Varela |
9 |
[GO] |
eLife |
2022―May―09 |
A LAMP sequencing approach for high-throughput co-detection of SARS-CoV-2 and influenza virus in human saliva |
Robert Warneford-Thomson, Parisha P Shah, Patrick Lundgren, Jonathan Lerner, Jason Morgan, Antonio Davila, et al. (+6) Benjamin S Abella, Kenneth Zaret, Jonathan Schug, Rajan Jain, Christoph A Thaiss, Roberto Bonasio |
10 |
[GO] |
eLife |
2022―Mar―24 |
Drug targeting Nsp1-ribosomal complex shows antiviral activity against SARS-CoV-2 |
Mohammad Afsar, Rohan Narayan, Md Noor Akhtar, Deepakash Das, Huma Rahil, Santhosh Kambaiah Nagaraj, et al. (+3) Sandeep M Eswarappa, Shashank Tripathi, Tanweer Hussain |
11 |
[GO] |
eLife |
2022―Mar―24 |
Conformational dynamics and allosteric modulation of the SARS-CoV-2 spike |
Marco A Díaz-Salinas, Qi Li, Monir Ejemel, Leonid Yurkovetskiy, Jeremy Luban, Kuang Shen, et al. (+2) Yang Wang, James B Munro |
12 |
[GO] |
eLife |
2022―Mar―24 |
The inherent flexibility of receptor binding domains in SARS-CoV-2 spike protein |
Hisham M Dokainish, Suyong Re, Takaharu Mori, Chigusa Kobayashi, Jaewoon Jung, Yuji Sugita |
13 |
[GO] |
eLife |
2022―Mar―23 |
Post-acute sequelae of COVID-19: A metabolic perspective |
Philipp E Scherer, John P Kirwan, Clifford J Rosen |
14 |
[GO] |
eLife |
2022―Mar―16 |
Coagulation factors directly cleave SARS-CoV-2 spike and enhance viral entry |
Edward R Kastenhuber, Marisa Mercadante, Benjamin Nilsson-Payant, Jared L Johnson, Javier A Jaimes, Frauke Muecksch, et al. (+7) Yiska Weisblum, Yaron Bram, Gary R Whittaker, Benjamin R tenOever, Robert E Schwartz, Vasuretha Chandar, Lewis Cantley |
15 |
[GO] |
eLife |
2022―Mar―16 |
Meta-Research: Individual-level researcher data confirm the widening gender gap in publishing rates during COVID-19 |
Emil Bargmann Madsen, Mathias Wullum Nielsen, Josefine Bjørnholm, Reshma Jagsi, Jens Peter Andersen |
16 |
[GO] |
eLife |
2022―Mar―16 |
SARS-CoV-2 Nsp14 mediates the effects of viral infection on the host cell transcriptome |
Michela Zaffagni, Jenna M Harris, Ines L Patop, Nagarjuna Reddy Pamudurti, Sinead Nguyen, Sebastian Kadener |
17 |
[GO] |
eLife |
2022―Mar―15 |
Boosting of cross-reactive antibodies to endemic coronaviruses by SARS-CoV-2 infection but not vaccination with stabilized spike |
Andrew R Crowley, Harini Natarajan, Andrew P Hederman, Carly A Bobak, Joshua A Weiner, Wendy Wieland-Alter, et al. (+11) Jiwon Lee, Evan M Bloch, Aaron AR Tobian, Andrew D Redd, Joel N Blankson, Dana Wolf, Tessa Goetghebuer, Arnaud Marchant, Ruth I Connor, Peter F Wright, Margaret E Ackerman |
18 |
[GO] |
eLife |
2022―Mar―11 |
Innate lymphoid cells and COVID-19 severity in SARS-CoV-2 infection |
Noah J Silverstein, Yetao Wang, Zachary Manickas-Hill, Claudia Carbone, Ann Dauphin, Brittany P Boribong, et al. (+11) Maggie Loiselle, Jameson Davis, Maureen M Leonard, Leticia Kuri-Cervantes, Nuala J Meyer, Michael R Betts, Jonathan Z Li, Bruce D Walker, Xu G Yu, Lael M Yonker, Jeremy Luban |
19 |
[GO] |
eLife |
2022―Feb―28 |
Ribosome profiling of porcine reproductive and respiratory syndrome virus reveals novel features of viral gene expression |
Georgia M Cook, Katherine Brown, Pengcheng Shang, Yanhua Li, Lior Soday, Adam M Dinan, et al. (+5) Charlotte Tumescheit, AP Adrian Mockett, Ying Fang, Andrew E Firth, Ian Brierley |
20 |
[GO] |
eLife |
2022―Feb―09 |
Inference of the SARS-CoV-2 generation time using UK household data |
William Stephen Hart, Sam Abbott, Akira Endo, Joel Hellewell, Elizabeth Miller, Nick Andrews, et al. (+3) Philip K Maini, Sebastian Funk, Robin N Thompson |
21 |
[GO] |
eLife |
2022―Jan―27 |
Vaccine-induced COVID-19 mimicry syndrome |
Eric Kowarz, Lea Krutzke, Marius Külp, Patrick Streb, Patrizia Larghero, Jennifer Reis, et al. (+4) Silvia Bracharz, Tatjana Engler, Stefan Kochanek, Rolf Marschalek |
22 |
[GO] |
eLife |
2022―Jan―20 |
What triggers inflammation in COVID-19? |
Tomohiro Sawa, Takaaki Akaike |
23 |
[GO] |
eLife |
2022―Jan―11 |
Golden Syrian hamster as a model to study cardiovascular complications associated with SARS-CoV-2 infection |
Zaigham Abbas Rizvi, Rajdeep Dalal, Srikanth Sadhu, Akshay Binayke, Jyotsna Dandotiya, Yashwant Kumar, et al. (+11) Tripti Shrivastava, Sonu Kumar Gupta, Suruchi Aggarwal, Manas Ranjan Tripathy, Deepak Kumar Rathore, Amit Kumar Yadav, Guruprasad R Medigeshi, Amit Kumar Pandey, Sweety Samal, Shailendra Asthana, Amit Awasthi |
24 |
[GO] |
eLife |
2021―Dec―20 |
Structure-guided glyco-engineering of ACE2 for improved potency as soluble SARS-CoV-2 decoy receptor |
Tümay Capraz, Nikolaus Ferdinand Kienzl, Elisabeth Laurent, Jan W Perthold, Esther Föderl-Höbenreich, Clemens Grünwald-Gruber, et al. (+10) Daniel Maresch, Vanessa Monteil, Janine Niederhöfer, Gerald Wirnsberger, Ali Mirazimi, Kurt Zatloukal, Lukas Mach, Josef M Penninger, Chris Oostenbrink, Johannes Stadlmann |
25 |
[GO] |
eLife |
2021―Dec―10 |
Add mass spectrometry to the pandemic toolbox |
Bart Van Puyvelde, Maarten Dhaenens |
26 |
[GO] |
eLife |
2021―Nov―25 |
Neutrophil-mediated oxidative stress and albumin structural damage predict COVID-19-associated mortality |
Mohamed A Badawy, Basma A Yasseen, Riem M El-Messiery, Engy A Abdel-Rahman, Aya A Elkhodiry, Azza G Kamel, et al. (+14) Hajar El-sayed, Asmaa M Shedra, Rehab Hamdy, Mona Zidan, Diaa Al-Raawi, Mahmoud Hammad, Nahla Elsharkawy, Mohamed El Ansary, Ahmed Al-Halfawy, Alaa Elhadad, Ashraf Hatem, Sherif Abouelnaga, Laura L Dugan, Sameh Saad Ali |
27 |
[GO] |
eLife |
2021―Nov―25 |
The alpha/B.1.1.7 SARS-CoV-2 variant exhibits significantly higher affinity for ACE-2 and requires lower inoculation doses to cause disease in K18-hACE2 mice |
Rafael Bayarri-Olmos, Laust Bruun Johnsen, Manja Idorn, Line S Reinert, Anne Rosbjerg, Søren Vang, et al. (+7) Cecilie Bo Hansen, Charlotte Helgstrand, Jais Rose Bjelke, Theresa Bak-Thomsen, Soren Paludan, Peter Garred, Mikkel-Ole Skjoedt |
28 |
[GO] |
eLife |
2021―Nov―23 |
Data-driven methodology for discovery and response to pulmonary symptomology in hypertension through statistical learning and data mining: Application to COVID-19 related pharmacovigilance |
Xuan Xu, Jessica Kawakami, Nuwan Indika Millagaha Gedara, Jim Riviere, Emma Meyer, Gerald J Wyckoff, Majid Jaberi-Douraki |
29 |
[GO] |
eLife |
2021―Oct―25 |
Effect of SARS-CoV-2 proteins on vascular permeability |
Rossana Rauti, Meishar Shahoha, Yael Leichtmann-Bardoogo, Rami Nasser, Eyal Paz, Rina Tamir, et al. (+9) Victoria Miller, Tal Babich, Kfir Shaked, Avner Ehrlich, Konstantinos Ioannidis, Yaakov Nahmias, Roded Sharan, Uri Ashery, Ben Meir Maoz |
30 |
[GO] |
eLife |
2021―Oct―18 |
Early prediction of in-hospital death of COVID-19 patients: a machine-learning model based on age, blood analyses, and chest x-ray score |
Emirena Garrafa, Marika Vezzoli, Marco Ravanelli, Davide Farina, Andrea Borghesi, Stefano Calza, Roberto Maroldi |
31 |
[GO] |
eLife |
2021―Oct―12 |
mRNA vaccine-induced T cells respond identically to SARS-CoV-2 variants of concern but differ in longevity and homing properties depending on prior infection status |
Jason Neidleman, Xiaoyu Luo, Matthew McGregor, Guorui Xie, Victoria Murray, Warner C Greene, et al. (+2) Sulggi A Lee, Nadia R Roan |
32 |
[GO] |
eLife |
2021―Oct―05 |
HIV status alters disease severity and immune cell responses in beta variant SARS-CoV-2 infection wave |
Farina Karim, Inbal Gazy, Sandile Cele, Yenzekile Zungu, Robert Krause, Mallory Bernstein, et al. (+18) Khadija Khan, Yashica Ganga, Hylton Errol Rodel, Ntombifuthi Mthabela, Matilda Mazibuko, Daniel Muema, Dirhona Ramjit, Thumbi Ndung'u, Willem Hanekom, Bernadett Gosnell, Richard J Lessells, Emily B Wong, Tulio de Oliveira, Yunus Moosa, Gil Lustig, Alasdair Leslie, Henrik Kløverpris, Alex Sigal |
33 |
[GO] |
eLife |
2021―Sep―30 |
Inhibition of SARS-CoV-2 polymerase by nucleotide analogs from a single-molecule perspective |
Mona Seifert, Subhas C Bera, Pauline van Nies, Robert N Kirchdoerfer, Ashleigh Shannon, Thi-Tuyet-Nhung Le, et al. (+14) Xiangzhi Meng, Hongjie Xia, James M Wood, Lawrence D Harris, Flavia S Papini, Jamie J Arnold, Steven Almo, Tyler L Grove, Pei-Yong Shi, Yan Xiang, Bruno Canard, Martin Depken, Craig E Cameron, David Dulin |
34 |
[GO] |
eLife |
2021―Sep―29 |
mRNA vaccination in people over 80 years of age induces strong humoral immune responses against SARS-CoV-2 with cross neutralisation of P.1 Brazilian variant |
Helen Parry, Gokhan Tut, Rachel Bruton, Sian Faustini, Christine Stephens, Philip Saunders, et al. (+19) Christopher Bentley, Katherine Hilyard, Kevin Brown, Gayatri Amirthalingam, Sue Charlton, Stephanie Leung, Emily Chiplin, Naomi S Coombes, Kevin R Bewley, Elizabeth J Penn, Cathy Rowe, Ashley Otter, Rosie Watts, Silvia D'Arcangelo, Bassam Hallis, Andrew Makin, Alex Richter, Jianmin Zuo, Paul Moss |
35 |
[GO] |
eLife |
2021―Sep―28 |
Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants |
Elizabeth Jaworski, Rose M Langsjoen, Brooke Mitchell, Barbara Judy, Patrick Newman, Jessica A Plante, et al. (+18) Kenneth S Plante, Aaron L Miller, Yiyang Zhou, Daniele Swetnam, Stephanea Sotcheff, Victoria Morris, Nehad Saada, Rafael RG Machado, Allan McConnell, Steven G Widen, Jill Thompson, Jianli Dong, Ping Ren, Rick B Pyles, Thomas G Ksiazek, Vineet D Menachery, Scott C Weaver, Andrew L Routh |
36 |
[GO] |
eLife |
2021―Sep―27 |
Quantifying the relationship between SARS-CoV-2 viral load and infectiousness |
Aurélien Marc, Marion Kerioui, François Blanquart, Julie Bertrand, Oriol Mitjà, Marc Corbacho-Monné, et al. (+2) Michael Marks, Jeremie Guedj |
37 |
[GO] |
eLife |
2021―Aug―31 |
Sterically confined rearrangements of SARS-CoV-2 Spike protein control cell invasion |
Esteban Dodero-Rojas, Jose N Onuchic, Paul Charles Whitford |
38 |
[GO] |
eLife |
2021―Aug―26 |
Effects of common mutations in the SARS-CoV-2 Spike RBD and its ligand the human ACE2 receptor on binding affinity and kinetics |
Michael I Barton, Stuart A MacGowan, Mikhail A Kutuzov, Omer Dushek, Geoffrey J Barton, P Anton van der Merwe |
39 |
[GO] |
eLife |
2021―Aug―24 |
Superspreaders drive the largest outbreaks of hospital onset COVID-19 infections |
Christopher JR Illingworth, William L Hamilton, Ben Warne, Matthew Routledge, Ashley Popay, Chris Jackson, et al. (+34) Tom Fieldman, Luke W Meredith, Charlotte J Houldcroft, Myra Hosmillo, Aminu S Jahun, Laura G Caller, Sarah L Caddy, Anna Yakovleva, Grant Hall, Fahad A Khokhar, Theresa Feltwell, Malte L Pinckert, Iliana Georgana, Yasmin Chaudhry, Martin D Curran, Surendra Parmar, Dominic Sparkes, Lucy Rivett, Nick K Jones, Sushmita Sridhar, Sally Forrest, Tom Dymond, Kayleigh Grainger, Chris Workman, Mark Ferris, Effrossyni Gkrania-Klotsas, Nicholas M Brown, Michael P Weekes, Stephen Baker, Sharon J Peacock, Ian G Goodfellow, Theodore Gouliouris, Daniela de Angelis, M Estée Török |
40 |
[GO] |
eLife |
2021―Aug―20 |
SARS-CoV-2 shedding dynamics across the respiratory tract, sex, and disease severity for adult and pediatric COVID-19 |
Paul Z Chen, Niklas Bobrovitz, Zahra Premji, Marion Koopmans, David N Fisman, Frank X Gu |
41 |
[GO] |
eLife |
2021―Aug―20 |
Integrated single-cell analysis unveils diverging immune features of COVID-19, influenza, and other community-acquired pneumonia |
Alex R Schuurman, Tom DY Reijnders, Anno Saris, Ivan Ramirez Moral, Michiel Schinkel, Justin de Brabander, et al. (+6) Christine van Linge, Louis Vermeulen, Brendon P Scicluna, W Joost Wiersinga, Felipe A Vieira Braga, Tom van der Poll |
42 |
[GO] |
eLife |
2021―Aug―20 |
N501Y mutation of spike protein in SARS-CoV-2 strengthens its binding to receptor ACE2 |
Fang Tian, Bei Tong, Liang Sun, Shengchao Shi, Bin Zheng, Zibin Wang, et al. (+2) Xianchi Dong, Peng Zheng |
43 |
[GO] |
eLife |
2021―Aug―13 |
Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19 |
Courtney Tindle, MacKenzie Fuller, Ayden Fonseca, Sahar Taheri, Stella-Rita Ibeawuchi, Nathan Beutler, et al. (+15) Gajanan Dattatray Katkar, Amanraj Claire, Vanessa Castillo, Moises Hernandez, Hana Russo, Jason Duran, Laura E Crotty Alexander, Ann Tipps, Grace Lin, Patricia A Thistlethwaite, Ranajoy Chattopadhyay, Thomas F Rogers, Debashis Sahoo, Pradipta Ghosh, Soumita Das |
44 |
[GO] |
eLife |
2021―Aug―13 |
Patterns of within-host genetic diversity in SARS-CoV-2 |
Gerry Tonkin-Hill, Inigo Martincorena, Roberto Amato, Andrew RJ Lawson, Moritz Gerstrung, Ian Johnston, et al. (+33) David K Jackson, Naomi Park, Stefanie V Lensing, Michael A Quail, Sonia Gonçalves, Cristina Ariani, Michael Spencer Chapman, William L Hamilton, Luke W Meredith, Grant Hall, Aminu S Jahun, Yasmin Chaudhry, Myra Hosmillo, Malte L Pinckert, Iliana Georgana, Anna Yakovleva, Laura G Caller, Sarah L Caddy, Theresa Feltwell, Fahad A Khokhar, Charlotte J Houldcroft, Martin D Curran, Surendra Parmar, Alex Alderton, Rachel Nelson, Ewan M Harrison, John Sillitoe, Stephen D Bentley, Jeffrey C Barrett, M Estee Torok, Ian G Goodfellow, Cordelia Langford, Dominic P Kwiatowski |
45 |
[GO] |
eLife |
2021―Aug―13 |
A proteome-wide genetic investigation identifies several SARS-CoV-2-exploited host targets of clinical relevance |
Mohd Anisul, Jarrod Shilts, Jeremy Schwartzentruber, James Hayhurst, Annalisa Buniello, Elmutaz Shaikho, et al. (+12) Jie Zheng, Michael Holmes, David Ochoa, Miguel Carmona, Joseph Maranville, Tom R Gaunt, Valur Emilsson, Vilmundur Gudnason, Ellen M McDonagh, Gavin J Wright, Maya Ghoussaini, Ian Dunham |
46 |
[GO] |
eLife |
2021―Aug―12 |
A comprehensive look at the COVID-19 pandemic death toll |
Lone Simonsen, Cecile Viboud |
47 |
[GO] |
eLife |
2021―Aug―05 |
Unsupervised machine learning reveals key immune cell subsets in COVID-19, rhinovirus infection, and cancer therapy |
Sierra M Barone, Alberta GA Paul, Lyndsey M Muehling, Joanne A Lannigan, William W Kwok, Ronald B Turner, et al. (+2) Judith A Woodfolk, Jonathan M Irish |
48 |
[GO] |
eLife |
2021―Aug―03 |
Within-host evolutionary dynamics of seasonal and pandemic human influenza A viruses in young children |
Alvin X Han, Zandra C Felix Garza, Matthijs RA Welkers, René M Vigeveno, Nhu Duong Tran, Thi Quynh Mai Le, et al. (+22) Thai Pham Quang, Dinh Thoang Dang, Thi Ngoc Anh Tran, Manh Tuan Ha, Thanh Hung Nguyen, Quoc Thinh Le, Thanh Hai Le, Thi Bich Ngoc Hoang, Kulkanya Chokephaibulkit, Pilaipan Puthavathana, Van Vinh Chau Nguyen, My Ngoc Nghiem, Van Kinh Nguyen, Tuyet Trinh Dao, Tinh Hien Tran, Heiman FL Wertheim, Peter W Horby, Annette Fox, H Rogier van Doorn, Dirk Eggink, Menno D de Jong, Colin A Russell |
49 |
[GO] |
eLife |
2021―Jul―29 |
Reduced antibody cross-reactivity following infection with B.1.1.7 than with parental SARS-CoV-2 strains |
Nikhil Faulkner, Kevin W Ng, Mary Y Wu, Ruth Harvey, Marios Margaritis, Stavroula Paraskevopoulou, et al. (+23) Catherine Houlihan, Saira Hussain, Maria Greco, William Bolland, Scott Warchal, Judith Heaney, Hannah Rickman, Moria Spyer, Daniel Frampton, Matthew Byott, Tulio de Oliveira, Alex Sigal, Svend Kjaer, Charles Swanton, Sonia Gandhi, Rupert Beale, Steve j Gamblin, John W McCauley, Rodney Stuart Daniels, Michael Howell, David Bauer, Eleni Nastouli, George Kassiotis |
50 |
[GO] |
eLife |
2021―Jul―27 |
Identification of drugs associated with reduced severity of COVID-19 - a case-control study in a large population |
Ariel Israel, Alejandro A Schäffer, Assi Cicurel, Kuoyuan Cheng, Sanju Sinha, Eyal Schiff, et al. (+4) Ilan Feldhamer, Ameer Tal, Gil Lavie, Eytan Ruppin |
51 |
[GO] |
eLife |
2021―Jul―27 |
Revisiting the guidelines for ending isolation for COVID-19 patients |
Yong Dam Jeong, Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Ana I Bento, Yasuhisa Fujita, et al. (+7) Il Hyo Jung, Kazuyuki Aihara, Koichi Watashi, Taiga Miyazaki, Takaji Wakita, Shingo Iwami, Marco Ajelli |
52 |
[GO] |
eLife |
2021―Jul―12 |
Ct threshold values, a proxy for viral load in community SARS-CoV-2 cases, demonstrate wide variation across populations and over time |
A Sarah Walker, Emma Pritchard, Thomas House, Julie V Robotham, Paul J Birrell, Iain Bell, et al. (+12) John I Bell, John N Newton, Jeremy Farrar, Ian Diamond, Ruth Studley, Jodie Hay, Karina-Doris Vihta, Timothy EA Peto, Nicole Stoesser, Philippa C Matthews, David W Eyre, Koen B Pouwels |
53 |
[GO] |
eLife |
2021―Jul―06 |
Mendelian randomization analysis provides causality of smoking on the expression of ACE2, a putative SARS-CoV-2 receptor |
Hui Liu, Junyi Xin, Sheng Cai, Xia Jiang |
54 |
[GO] |
eLife |
2021―Jun―30 |
Tracking excess mortality across countries during the COVID-19 pandemic with the World Mortality Dataset |
Ariel Karlinsky, Dmitry Kobak |
55 |
[GO] |
eLife |
2021―Jun―29 |
Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data |
Oliver Stirrup, Joseph Hughes, Matthew Parker, David G Partridge, James G Shepherd, James Blackstone, et al. (+10) Francesc Coll, Alexander Keeley, Benjamin B Lindsey, Aleksandra Marek, Christine Peters, Joshua B Singer, Asif Tamuri, Thushan I de Silva, Emma C Thomson, Judith Breuer |
56 |
[GO] |
eLife |
2021―Jun―24 |
Impact of COVID-19-related disruptions to measles, meningococcal A, and yellow fever vaccination in 10 countries |
Katy A M Gaythorpe, Kaja Abbas, John Huber, Andromachi Karachaliou, Niket Thakkar, Kim Woodruff, et al. (+8) Xiang Li, Susy Echeverria-Londono, Matthew Ferrari, Michael Jackson, Kevin McCarthy, T Alex Perkins, Caroline Trotter, Mark Jit |
57 |
[GO] |
eLife |
2021―Jun―22 |
Smartphone Screen Testing, a novel pre-diagnostic method to identify SARS-CoV-2 infectious individuals |
Rodrigo M Young, Camila J Solis-Cascante, Andres Barriga-Fehrman, Carlos Abogabir, Alvaro R Thadani, Mariana Labarca, et al. (+13) Eva Bustamante, Cecilia V Tapia, Antonia G Sarda, Francisca Sepulveda, Nadia Pozas, Leslie C Cerpa, María A Lavanderos, Nelson M Varela, Alvaro Santibañez, Ana M Sandino, Felipe Reyes-Lopez, Garth Dixon, Luis A Quiñones |
58 |
[GO] |
eLife |
2021―Jun―21 |
Ketogenic diet restrains aging-induced exacerbation of coronavirus infection in mice |
Seungjin Ryu, Irina Shchukina, Yun-Hee Youm, Hua Qing, Brandon Hilliard, Tamara Dlugos, et al. (+11) Xinbo Zhang, Yuki Yasumoto, Carmen J Booth, Carlos Fernández-Hernando, Yajaira Suárez, Kamal Khanna, Tamas L Horvath, Marcelo O Dietrich, Maxim N Artyomov, Andrew Wang, Vishwa Deep Dixit |
59 |
[GO] |
eLife |
2021―Jun―09 |
FnCas9 based CRISPR diagnostic for rapid and accurate detection of major SARS-CoV2 variants on a paper strip |
Manoj Kumar, Sneha Gulati, Asgar H Ansari, Rhythm Phutela, Sundaram Acharya, Mohd Azhar, et al. (+9) Jayaram Murthy, Poorti Kathpalia, Akshay Kanakan, Ranjeet Maurya, Janani Srinivasa Vasudevan, Aparna Murali, Rajesh Pandey, Souvik Maiti, Debojyoti Chakraborty |
60 |
[GO] |
eLife |
2021―Jun―04 |
Convalescent plasma use in the United States was inversely correlated with COVID-19 mortality |
Arturo Casadevall, Quigly Dragotakes, Patrick W Johnson, Jonathon W Senefeld, Stephen A Klassen, R Scott Wright, et al. (+3) Michael J Joyner, Nigel Paneth, Rickey E Carter |
61 |
[GO] |
eLife |
2021―May―27 |
A high rate of COVID-19 vaccine hesitancy in a large-scale survey on Arabs |
Eyad A Qunaibi, Mohamed Helmy, Iman Basheti, Iyad Sultan |
62 |
[GO] |
eLife |
2021―May―18 |
Avoiding culture shock with the SARS-CoV-2 spike protein |
Benjamin G Hale |
63 |
[GO] |
eLife |
2021―May―18 |
Modeling the impact of racial and ethnic disparities on COVID-19 epidemic dynamics |
Kevin C Ma, Tigist F Menkir, Stephen M Kissler, Yonatan H Grad, Marc Lipsitch |
64 |
[GO] |
eLife |
2021―May―04 |
Metabolic biomarker profiling for identification of susceptibility to severe pneumonia and COVID-19 in the general population |
Heli Julkunen, Anna Cichońska, P Eline Slagboom, Peter Würtz |
65 |
[GO] |
eLife |
2021―Apr―27 |
Mechanistic theory predicts the effects of temperature and humidity on inactivation of SARS-CoV-2 and other enveloped viruses |
Dylan H Morris, Kwe Claude Yinda, Amandine Gamble, Fernando W Rossine, Qishen Huang, Trenton Bushmaker, et al. (+7) Robert J Fischer, M Jeremiah Matson, Neeltje Van Doremalen, Peter J Vikesland, Linsey C Marr, Vincent J Munster, James O Lloyd-Smith |
66 |
[GO] |
eLife |
2021―Apr―26 |
High infectiousness immediately before COVID-19 symptom onset highlights the importance of continued contact tracing |
William Stephen Hart, Philip K Maini, Robin N Thompson |
67 |
[GO] |
eLife |
2021―Apr―23 |
SARS-CoV-2 requires cholesterol for viral entry and pathological syncytia formation |
David W Sanders, Chanelle C Jumper, Paul J Ackerman, Dan Bracha, Anita Donlic, Hahn Kim, et al. (+13) Devin Kenney, Ivan Castello-Serrano, Saori Suzuki, Tomokazu Tamura, Alexander H Tavares, Mohsan Saeed, Alex S Holehouse, Alexander Ploss, Ilya Levental, Florian Douam, Robert F Padera, Bruce D Levy, Clifford P Brangwynne |
68 |
[GO] |
eLife |
2021―Apr―20 |
Sensitivity of ID NOW and RT-PCR for detection of SARS-CoV-2 in an ambulatory population |
Yuan-Po Tu, Jameel Iqbal, Timothy O'Leary |
69 |
[GO] |
eLife |
2021―Apr―20 |
Insights from a Pan India Sero-Epidemiological survey (Phenome-India Cohort) for SARS-CoV2 |
Salwa Naushin, Viren Sardana, Rajat Ujjainiya, Nitin Bhatheja, Rintu Kutum, Akash Kumar Bhaskar, et al. (+130) Shalini Pradhan, Satyartha Prakash, Raju Khan, Birendra Singh Rawat, Karthik Bharadwaj Tallapaka, Mahesh Anumalla, Giriraj Ratan Chandak, Amit Lahiri, Susanta Kar, Shrikant Ramesh Mulay, Madhav Nilakanth Mugale, Mrigank Srivastava, Shaziya Khan, Anjali Srivastava, Bhawana Tomar, Murugan Veerapandian, Ganesh Venkatachalam, Selvamani Raja Vijayakumar, Ajay Agarwal, Dinesh Gupta, Prakash M Halami, Muthukumar Serva Peddha, Gopinath M Sundaram, Ravindra P Veeranna, Anirban Pal, Vinay Kumar Agarwal, Anil Ku Maurya, Ranvijay Kumar Singh, Ashok Kumar Raman, Suresh Kumar Anandasadagopan, Parimala Karuppanan, Subramanian Venkatesan, Harish Kumar Sardana, Anamika Kothari, Rishabh Jain, Anupama Thakur, Devendra Singh Parihar, Anas Saifi, Jasleen Kaur, Virendra Kumar, Avinash Mishra, Iranna Gogeri, Geethavani Rayasam, Praveen Singh, Rahul Chakraborty, Gaura Chaturvedi, Pinreddy Karunakar, Rohit Yadav, Sunanda Singhmar, Dayanidhi Singh, Sharmistha Sarkar, Purbasha Bhattacharya, Sundaram Acharya, Vandana Singh, Shweta Verma, Drishti Soni, Surabhi Seth, Sakshi Vashisht, Sarita Thakran, Firdaus Fatima, Akash Pratap Singh, Akanksha Sharma, Babita Sharma, Manikandan Subramanian, Yogendra S Padwad, Vipin Hallan, Vikram Patial, Damanpreet Singh, Narendra Vijay Tripude, Partha Chakrabarti, Sujay Krishna Maity, Dipyaman Ganguly, Jit Sarkar, Sistla Ramakrishna, Balthu Narender Kumar, Kiran A Kumar, Sumit G Gandhi, Piyush Singh Jamwal, Rekha Chouhan, Vijay Lakshmi Jamwal, Nitika Kapoor, Debashish Ghosh, Ghanshyam Thakkar, Umakanta Subudhi, Pradip Sen, Saumya Ray Chaudhury, Rashmi Kumar, Pawan Gupta, Amit Tuli, Deepak Sharma, Rajesh P Ringe, Amarnarayan D, Mahesh Kulkarni, Dhansekaran Shanmugam, Mahesh S Dharne, Sayed G Dastager, Rakesh Joshi, Amita P Patil, Sachin N Mahajan, Abujunaid Habib Khan, Vasudev Wagh, Rakesh Kumar Yadav, Ajinkya Khilari, Mayuri Bhadange, Arvindkumar H Chaurasiya, Shabda E Kulsange, Krishna Khairnar, Shilpa Paranjape, Jatin Kalita, Narahari G Sastry, Tridip Phukan, Prasenjit Manna, Wahengbam Romi, Pankaj Bharali, Dibyajyoti Ozah, Ravi Kumar Sahu, Elapavalooru VSSK Babu, Rajeev Sukumaran, Aiswarya R Nair, Prajeesh Kooloth Valappil, Anoop Puthiyamadam, Adarsh Velayudhanpillai, Kalpana Chodankar, Samir Damare, Yennapu Madhavi, Ved Varun Aggarwal, Sumit Dahiya, Anurag Agrawal, Debasis Dash, Shantanu Sengupta |
70 |
[GO] |
eLife |
2021―Apr―16 |
Heterogeneity in transmissibility and shedding SARS-CoV-2 via droplets and aerosols |
Paul Z Chen, Niklas Bobrovitz, Zahra Premji, Marion Koopmans, David N Fisman, Frank X Gu |
71 |
[GO] |
eLife |
2021―Apr―09 |
Human airway cells prevent SARS-CoV-2 multibasic cleavage site cell culture adaptation |
Mart M Lamers, Anna Z Mykytyn, Tim I Breugem, Yiquan Wang, Douglas C Wu, Samra Riesebosch, et al. (+5) Petra B van den Doel, Debby Schipper, Theo Bestebroer, Nicholas C Wu, Bart L Haagmans |
72 |
[GO] |
eLife |
2021―Apr―08 |
Single-dose BNT162b2 vaccine protects against asymptomatic SARS-CoV-2 infection |
Nick K Jones, Lucy Rivett, Shaun Seaman, Richard J Samworth, Ben Warne, Chris Workman, et al. (+10) Mark Ferris, Jo Wright, Natalie Quinnell, Ashley Shaw, Ian G Goodfellow, Paul J Lehner, Rob Howes, Giles Wright, Nicholas J Matheson, Michael P Weekes |
73 |
[GO] |
eLife |
2021―Mar―30 |
Early postmortem mapping of SARS-CoV-2 RNA in patients with COVID-19 and the correlation with tissue damage |
Stefanie Deinhardt-Emmer, Daniel Wittschieber, Juliane Sanft, Sandra Kleemann, Stefan Elschner, Karoline Frieda Haupt, et al. (+11) Vanessa Vau, Clio Häring, Jürgen Rödel, Andreas Henke, Christina Ehrhardt, Michael Bauer, Mike Philipp, Nikolaus Gaßler, Sandor Nietzsche, Bettina Löffler, Gita Mall |
74 |
[GO] |
eLife |
2021―Mar―29 |
Saliva TwoStep for rapid detection of asymptomatic SARS-CoV-2 carriers |
Qing Yang, Nicholas R Meyerson, Stephen K Clark, Camille L Paige, Will T Fattor, Alison R Gilchrist, et al. (+19) Arturo Barbachano-Guerrero, Benjamin G Healy, Emma R Worden-Sapper, Sharon S Wu, Denise Muhlrad, Carolyn J Decker, Tassa K Saldi, Erika Lasda, Patrick Gonzales, Morgan R Fink, Kimngan L Tat, Cole R Hager, Jack C Davis, Christopher D Ozeroff, Gloria R Brisson, Matthew B McQueen, Leslie A Leinwand, Roy Parker, Sara L Sawyer |
75 |
[GO] |
eLife |
2021―Mar―23 |
Rare variants increase the risk of severe COVID-19 |
Frank L van de Veerdonk, Mihai G Netea |
76 |
[GO] |
eLife |
2021―Mar―23 |
Convalescent COVID-19 patients are susceptible to endothelial dysfunction due to persistent immune activation |
Florence WJ Chioh, Siew-Wai Fong, Barnaby E Young, Kan-Xing Wu, Anthony Siau, Shuba Krishnan, et al. (+13) Yi-Hao Chan, Guillaume Carissimo, Louis LY Teo, Fei Gao, Ru San Tan, Liang Zhong, Angela S Koh, Seow-Yen Tan, Paul A Tambyah, Laurent Renia, Lisa FP Ng, David C Lye, Christine Cheung |
77 |
[GO] |
eLife |
2021―Mar―17 |
Genomic and healthcare dynamics of nosocomial SARS-CoV-2 transmission |
Jamie M Ellingford, Ryan George, John H McDermott, Shazaad Ahmad, Jonathan J Edgerley, David Gokhale, et al. (+4) William G Newman, Stephen Ball, Nicholas Machin, Graeme CM Black |
78 |
[GO] |
eLife |
2021―Mar―11 |
Longitudinal proteomic profiling of dialysis patients with COVID-19 reveals markers of severity and predictors of death |
Jack Gisby, Candice L Clarke, Nicholas Medjeral-Thomas, Talat H Malik, Artemis Papadaki, Paige M Mortimer, et al. (+19) Norzawani B Buang, Shanice Lewis, Marie Pereira, Frederic Toulza, Ester Fagnano, Marie-Anne Mawhin, Emma E Dutton, Lunnathaya Tapeng, Arianne C Richard, Paul DW Kirk, Jacques Behmoaras, Eleanor Sandhu, Stephen P McAdoo, Maria F Prendecki, Matthew C Pickering, Marina Botto, Michelle Willicombe, David C Thomas, James Edward Peters |
79 |
[GO] |
eLife |
2021―Mar―08 |
An open label trial of anakinra to prevent respiratory failure in COVID-19 |
Evdoxia Kyriazopoulou, Periklis Panagopoulos, Symeon Metallidis, George N Dalekos, Garyphallia Poulakou, Nikolaos Gatselis, et al. (+33) Eleni Karakike, Maria Saridaki, Georgia Loli, Aggelos Stefos, Danai Prasianaki, Sarah Georgiadou, Olga Tsachouridou, Vasileios Petrakis, Konstantinos Tsiakos, Maria Kosmidou, Vassiliki Lygoura, Maria Dareioti, Haralampos Milionis, Ilias C Papanikolaou, Karolina Akinosoglou, Dimitra-Melia Myrodia, Areti Gravvani, Aliki Stamou, Theologia Gkavogianni, Konstantina Katrini, Theodoros Marantos, Ioannis P Trontzas, Konstantinos Syrigos, Loukas Chatzis, Stamatios Chatzis, Nikolaos Vechlidis, Christina Avgoustou, Stamatios Chalvatzis, Miltiades Kyprianou, Jos WM van der Meer, Jesper Eugen-Olsen, Mihai G Netea, Evangelos J Giamarellos-Bourboulis |
80 |
[GO] |
eLife |
2021―Mar―08 |
SARS-CoV-2 suppresses anticoagulant and fibrinolytic gene expression in the lung |
Alan E Mast, Alisa S Wolberg, David Gailani, Michael R Garvin, Christiane Alvarez, J Izaak Miller, et al. (+2) Bruce Aronow, Daniel Jacobson |
81 |
[GO] |
eLife |
2021―Mar―05 |
Estimating SARS-CoV-2 seroprevalence and epidemiological parameters with uncertainty from serological surveys |
Daniel B Larremore, Bailey K Fosdick, Kate M Bubar, Sam Zhang, Stephen M Kissler, C Jessica E Metcalf, et al. (+2) Caroline Buckee, Yonatan H Grad |
82 |
[GO] |
eLife |
2021―Mar―02 |
Association of Toll-like receptor 7 variants with life-threatening COVID-19 disease in males: findings from a nested case-control study |
Chiara Fallerini, Sergio Daga, Stefania Mantovani, Elisa Benetti, Nicola Picchiotti, Daniela Francisci, et al. (+19) Francesco Paciosi, Elisabetta Schiaroli, Margherita Baldassarri, Francesca Fava, Maria Palmieri, Serena Ludovisi, Francesco Castelli, Eugenia Quiros-Roldan, Massimo Vaghi, Stefano Rusconi, Matteo Siano, Maria Bandini, Ottavia Spiga, Katia Capitani, Simone Furini, Francesca Mari, Alessandra Renieri, Mario U Mondelli, Elisa Frullanti |
83 |
[GO] |
eLife |
2021―Mar―02 |
Genomic epidemiology of COVID-19 in care homes in the East of England |
William L Hamilton, Gerry Tonkin-Hill, Emily R Smith, Dinesh Aggarwal, Charlotte J Houldcroft, Ben Warne, et al. (+31) Colin S Brown, Luke W Meredith, Myra Hosmillo, Aminu S Jahun, Martin D Curran, Surendra Parmar, Laura G Caller, Sarah L Caddy, Fahad A Khokhar, Anna Yakovleva, Grant Hall, Theresa Feltwell, Malte L Pinckert, Iliana Georgana, Yasmin Chaudhry, Nicholas M Brown, Sonia Gonçalves, Roberto Amato, Ewan M Harrison, Mathew A Beale, Michael Spencer Chapman, David K Jackson, Ian Johnston, Alex Alderton, John Sillitoe, Cordelia Langford, Gordon Dougan, Sharon J Peacock, Dominic P Kwiatowski, Ian G Goodfellow, M Estee Torok |
84 |
[GO] |
eLife |
2021―Feb―23 |
COVID-19 CG enables SARS-CoV-2 mutation and lineage tracking by locations and dates of interest |
Albert Tian Chen, Kevin Altschuler, Shing Hei Zhan, Yujia Alina Chan, Benjamin E Deverman |
85 |
[GO] |
eLife |
2021―Feb―23 |
Viral load and contact heterogeneity predict SARS-CoV-2 transmission and super-spreading events |
Ashish Goyal, Daniel B Reeves, E Fabian Cardozo-Ojeda, Joshua T Schiffer, Bryan T Mayer |
86 |
[GO] |
eLife |
2021―Feb―16 |
Antimicrobial resistance and COVID-19: Intersections and implications |
Gwenan M Knight, Rebecca E Glover, C Finn McQuaid, Ioana D Olaru, Karin Gallandat, Quentin J Leclerc, et al. (+5) Naomi M Fuller, Sam J Willcocks, Rumina Hasan, Esther van Kleef, Clare IR Chandler |
87 |
[GO] |
eLife |
2021―Feb―11 |
The Spike D614G mutation increases SARS-CoV-2 infection of multiple human cell types |
Zharko Daniloski, Tristan X Jordan, Juliana K Ilmain, Xinyi Guo, Gira Bhabha, Benjamin R tenOever, Neville E Sanjana |
88 |
[GO] |
eLife |
2021―Feb―08 |
SARS-CoV-2 S protein:ACE2 interaction reveals novel allosteric targets |
Palur V Raghuvamsi, Nikhil Kumar Tulsian, Firdaus Samsudin, Xinlei Qian, Kiren Purushotorman, Gu Yue, et al. (+6) Mary M Kozma, Wong Yee Hwa, Julien Lescar, Peter J Bond, Paul Anthony MacAry, Ganesh Srinivasan Anand |
89 |
[GO] |
eLife |
2021―Feb―05 |
Quantifying the impact of quarantine duration on COVID-19 transmission |
Peter Ashcroft, Sonja Lehtinen, Daniel C Angst, Nicola Low, Sebastian Bonhoeffer |
90 |
[GO] |
eLife |
2021―Jan―19 |
Evidence for adaptive evolution in the receptor-binding domain of seasonal coronaviruses OC43 and 229E |
Kathryn E Kistler, Trevor Bedford |
91 |
[GO] |
eLife |
2021―Jan―14 |
Cytokine ranking via mutual information algorithm correlates cytokine profiles with presenting disease severity in patients infected with SARS-CoV-2 |
Kelsey E Huntington, Anna D Louie, Chun Geun Lee, Jack A Elias, Eric A Ross, Wafik S El-Deiry |
92 |
[GO] |
eLife |
2021―Jan―05 |
Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T cell memory formation after mild COVID-19 infection |
Anastasia A Minervina, Ekaterina A Komech, Aleksei Titov, Meriem Bensouda Koraichi, Elisa Rosati, Ilgar Z Mamedov, et al. (+7) Andre Franke, Grigory A Efimov, Dmitriy M Chudakov, Thierry Mora, Aleksandra M Walczak, Yuri B Lebedev, Mikhail V Pogorelyy |
93 |
[GO] |
eLife |
2021―Jan―04 |
SARS-CoV-2 entry into human airway organoids is serine protease-mediated and facilitated by the multibasic cleavage site |
Anna Z Mykytyn, Tim I Breugem, Samra Riesebosch, Debby Schipper, Petra B van den Doel, Robbert J Rottier, et al. (+2) Mart M Lamers, Bart L Haagmans |
94 |
[GO] |
eLife |
2020―Dec―17 |
Post-acute COVID-19 associated with evidence of bystander T-cell activation and a recurring AMR bacterial pneumonia |
Michaela Gregorova, Daniel Morse, Tarcisio Brignoli, Joseph Steventon, Fergus Hamilton, Mahableshwar Albur, et al. (+24) David Arnold, Matthew Thomas, Alice Halliday, Holly Baum, Christopher Rice, Matthew B Avison, Andrew D Davidson, Marianna Santopaolo, Elizabeth Oliver, Anu Goenka, Adam Finn, Linda Wooldridge, Borko Amulic, Rosemary J Boyton, Daniel M Altmann, David K Butler, Claire McMurray, Joanna Stockton, Sam Nicholls, Charles Cooper, Nicholas Loman, Michael J Cox, Laura Rivino, Ruth C Massey |
95 |
[GO] |
eLife |
2020―Dec―15 |
Neutralizing SARS-CoV-2 |
Eric Poeschla |
96 |
[GO] |
eLife |
2020―Nov―26 |
A novel haemocytometric COVID-19 prognostic score developed and validated in an observational multicentre European hospital-based study |
Joachim Linssen, Anthony Ermens, Marvin Berrevoets, Michela Seghezzi, Giulia Previtali, Simone van der Sar-van der Brugge, et al. (+17) Henk Russcher, Annelies Verbon, Judith MEP Gillis, Jürgen Riedl, Eva de Jongh, Jarob Saker, Marion Münster, Imke CA Munnix, Anthonius Dofferhof, Volkher Scharnhorst, Heidi Ammerlaan, Kathleen Deiteren, Stephan JL Bakker, Lucas Joost Van Pelt, Yvette Kluiters-de Hingh, Mathie PG Leers, Andre J van der Ven |
97 |
[GO] |
eLife |
2020―Nov―24 |
COVID-19 research risks ignoring important host genes due to pre-established research patterns |
Thomas Stoeger, Luís A Nunes Amaral |
98 |
[GO] |
eLife |
2020―Nov―09 |
ACE2: Evidence of role as entry receptor for SARS-CoV-2 and implications in comorbidities |
Natalia Zamorano Cuervo, Nathalie Grandvaux |
99 |
[GO] |
eLife |
2020―Nov―09 |
Single cell multiomic profiling of human lung reveals cell type-specific and age-dynamic control of SARS-CoV2 host genes |
Allen Wang, Joshua Chiou, Olivier B Poirion, Justin Buchanan, Michael J Valdez, Jamie M Verheyden, et al. (+20) Xiaomeng Hou, Parul Kudtarkar, Sharvari Narendra, Jacklyn M Newsome, Minzhe Guo, Dina A Faddah, Kai Zhang, Randee E Young, Justinn Barr, Eniko Sajti, Ravi Misra, Heidie Huyck, Lisa Rogers, Cory Poole, Jeffery A Whitsett, Gloria Pryhuber, Yan Xu, Kyle J Gaulton, Sebastian Preissl, Xin Sun |
100 |
[GO] |
eLife |
2020―Oct―28 |
Escape from neutralizing antibodies by SARS-CoV-2 spike protein variants |
Yiska Weisblum, Fabian Schmidt, Fengwen Zhang, Justin DaSilva, Daniel Poston, Julio CC Lorenzi, et al. (+18) Frauke Muecksch, Magdalena Rutkowska, Hans-Heinrich Hoffmann, Eleftherios Michailidis, Christian Gaebler, Marianna Agudelo, Alice Cho, Zijun Wang, Anna Gazumyan, Melissa Cipolla, Larry Luchsinger, Christopher D Hillyer, Marina Caskey, Davide F Robbiani, Charles M Rice, Michel C Nussenzweig, Theodora Hatziioannou, Paul D Bieniasz |
101 |
[GO] |
eLife |
2020―Oct―26 |
Inhibition of SARS-CoV-2 viral entry upon blocking N- and O-glycan elaboration |
Qi Yang, Thomas A Hughes, Anju Kelkar, Xinheng Yu, Kai Cheng, Sheldon Park, et al. (+3) Wei-Chiao Huang, Jonathan F Lovell, Sriram Neelamegham |
102 |
[GO] |
eLife |
2020―Oct―12 |
Early prediction of level-of-care requirements in patients with COVID-19 |
Boran Hao, Shahabeddin Sotudian, Taiyao Wang, Tingting Xu, Yang Hu, Apostolos Gaitanidis, et al. (+3) Kerry Breen, George C Velmahos, Ioannis Ch Paschalidis |
103 |
[GO] |
eLife |
2020―Oct―01 |
Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic |
Chase W Nelson, Zachary Ardern, Tony L Goldberg, Chen Meng, Chen-Hao Kuo, Christina Ludwig, et al. (+2) Sergios-Orestis Kolokotronis, Xinzhu Wei |
104 |
[GO] |
eLife |
2020―Sep―15 |
Obesity and diabetes as comorbidities for COVID-19: Underlying mechanisms and the role of viral-bacterial interactions |
Ilja L Kruglikov, Manasi Shah, Philipp E Scherer |
105 |
[GO] |
eLife |
2020―Sep―07 |
Quantifying antibody kinetics and RNA detection during early-phase SARS-CoV-2 infection by time since symptom onset |
Benny Borremans, Amandine Gamble, K C Prager, Sarah K Helman, Abby M McClain, Caitlin Cox, et al. (+2) Van Savage, James O Lloyd-Smith |
106 |
[GO] |
eLife |
2020―Aug―24 |
The contribution of asymptomatic SARS-CoV-2 infections to transmission on the Diamond Princess cruise ship |
Jon C Emery, Timothy W Russell, Yang Liu, Joel Hellewell, Carl AB Pearson, Gwenan M Knight, et al. (+5) Rosalind M Eggo, Adam J Kucharski, Sebastian Funk, Stefan Flasche, Rein M G J Houben |
107 |
[GO] |
eLife |
2020―Aug―21 |
Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study |
David W Eyre, Sheila F Lumley, Denise O'Donnell, Mark Campbell, Elizabeth Sims, Elaine Lawson, et al. (+45) Fiona Warren, Tim James, Stuart Cox, Alison Howarth, George Doherty, Stephanie B Hatch, James Kavanagh, Kevin K Chau, Philip W Fowler, Jeremy Swann, Denis Volk, Fan Yang-Turner, Nicole Stoesser, Philippa C Matthews, Maria Dudareva, Timothy Davies, Robert H Shaw, Leon Peto, Louise O Downs, Alexander Vogt, Ali Amini, Bernadette C Young, Philip George Drennan, Alexander J Mentzer, Donal T Skelly, Fredrik Karpe, Matt J Neville, Monique Andersson, Andrew J Brent, Nicola Jones, Lucas Martins Ferreira, Thomas Christott, Brian D Marsden, Sarah Hoosdally, Richard Cornall, Derrick W Crook, David I Stuart, Gavin Screaton, Timothy EA Peto, Bruno Holthof, Anne-Marie O'Donnell, Daniel Ebner, Christopher P Conlon, Katie Jeffery, Timothy M Walker |
108 |
[GO] |
eLife |
2020―Aug―20 |
3d virtual pathohistology of lung tissue from COVID-19 patients based on phase contrast x-ray tomography |
Marina Eckermann, Jasper Frohn, Marius Reichardt, Markus Osterhoff, Michael Sprung, Fabian Westermeier, et al. (+4) Alexandar Tzankov, Mark Kühnel, Danny Jonigk, Tim Salditt |
109 |
[GO] |
eLife |
2020―Aug―17 |
Inference from longitudinal laboratory tests characterizes temporal evolution of COVID-19-associated coagulopathy (CAC) |
Colin Pawlowski, Tyler Wagner, Arjun Puranik, Karthik Murugadoss, Liam Loscalzo, AJ Venkatakrishnan, et al. (+13) Rajiv K Pruthi, Damon E Houghton, John C O'Horo, William G Morice, Amy W Williams, Gregory J Gores, John Halamka, Andrew D Badley, MD, Elliot S Barnathan, Hideo Makimura, Najat Khan, Venky Soundararajan |
110 |
[GO] |
eLife |
2020―Aug―13 |
Early analysis of the Australian COVID-19 epidemic |
David J Price, Freya M Shearer, Michael T Meehan, Emma McBryde, Robert Moss, Nick Golding, et al. (+7) Eamon J Conway, Peter Dawson, Deborah Cromer, James Wood, Sam Abbott, Jodie McVernon, James M McCaw |
111 |
[GO] |
eLife |
2020―Jul―30 |
Neuropathogenesis of SARS-CoV-2 infection |
Shumayila Khan, James Gomes |
112 |
[GO] |
eLife |
2020―Jul―14 |
Does the human placenta express the canonical cell entry mediators for SARS-CoV-2? |
Roger Pique-Regi, Roberto Romero, Adi L Tarca, Francesca Luca, Yi Xu, Adnan Alazizi, et al. (+3) Yaozhu Leng, Chaur-Dong Hsu, Nardhy Gomez-Lopez |
113 |
[GO] |
eLife |
2020―Jul―07 |
Augmented curation of clinical notes from a massive EHR system reveals symptoms of impending COVID-19 diagnosis |
Tyler Wagner, FNU Shweta, Karthik Murugadoss, Samir Awasthi, AJ Venkatakrishnan, Sairam Bade, et al. (+26) Arjun Puranik, Martin Kang, Brian W Pickering, John C O'Horo, Philippe R Bauer, Raymund R Razonable, Paschalis Vergidis, Zelalem Temesgen, Stacey Rizza, Maryam Mahmood, Walter R Wilson, Douglas Challener, Praveen Anand, Matt Liebers, Zainab Doctor, Eli Silvert, Hugo Solomon, Akash Anand, Rakesh Barve, Gregory Gores, Amy W Williams, William G Morice, John Halamka, Andrew Badley, MD, Venky Soundararajan |
114 |
[GO] |
eLife |
2020―Jul―07 |
A mechanistic model and therapeutic interventions for COVID-19 involving a RAS-mediated bradykinin storm |
Mike R Garvin, Christiane Alvarez, J Izaak Miller, Erica T Prates, Angelica M Walker, B Kirtley Amos, et al. (+4) Alan E Mast, Amy Justice, Bruce Aronow, Daniel Jacobson |
115 |
[GO] |
eLife |
2020―Jun―23 |
Antibodies to SARS-CoV-2 and their potential for therapeutic passive immunization |
PJ Klasse, John P Moore |
116 |
[GO] |
eLife |
2020―Jun―22 |
Evidence for transmission of COVID-19 prior to symptom onset |
Lauren C Tindale, Jessica E Stockdale, Michelle Coombe, Emma S Garlock, Wing Yin Venus Lau, Manu Saraswat, et al. (+4) Louxin Zhang, Dongxuan Chen, Jacco Wallinga, Caroline Colijn |
117 |
[GO] |
eLife |
2020―Jun―19 |
Effective control of SARS-CoV-2 transmission between healthcare workers during a period of diminished community prevalence of COVID-19 |
Nick K Jones, Lucy Rivett, Dominic Sparkes, Sally Forrest, Sushmita Sridhar, Jamie Young, et al. (+28) Joana Pereira-Dias, Claire Cormie, Harmeet Gill, Nicola Reynolds, Michelle Wantoch, Matthew Routledge, Ben Warne, Jack Levy, WIlliam David Córdova Jiménez, Fathima Nisha Begum Samad, Chris McNicholas, Mark Ferris, Jane Gray, Michael Gill, Martin D Curran, Stewart Fuller, Afzal Chaudhry, Ashley Shaw, John R Bradley, Gregory J Hannon, Ian G Goodfellow, Gordon Dougan, Kenneth G C Smith, Paul J Lehner, Giles Wright, Nicholas J Matheson, Stephen Baker, Michael P Weekes |
118 |
[GO] |
eLife |
2020―Jun―15 |
Meta-Research: COVID-19 medical papers have fewer women first authors than expected |
Jens Peter Andersen, Mathias Wullum Nielsen, Nicole L Simone, Resa E Lewiss, Reshma Jagsi |
119 |
[GO] |
eLife |
2020―Jun―08 |
A Global Immunological Observatory to meet a time of pandemics |
Michael J Mina, C Jessica E Metcalf, Adrian B McDermott, Daniel C Douek, Jeremy Farrar, Bryan T Grenfell |
120 |
[GO] |
eLife |
2020―May―28 |
Knowledge synthesis of 100 million biomedical documents augments the deep expression profiling of coronavirus receptors |
AJ Venkatakrishnan, Arjun Puranik, Akash Anand, David Zemmour, Xiang Yao, Xiaoying Wu, et al. (+12) Ramakrishna Chilaka, Dariusz K Murakowski, Kristopher Standish, Bharathwaj Raghunathan, Tyler Wagner, Enrique Garcia-Rivera, Hugo Solomon, Abhinav Garg, Rakesh Barve, Anuli Anyanwu-Ofili, Najat Khan, Venky Soundararajan |
121 |
[GO] |
eLife |
2020―May―26 |
SARS-CoV-2 strategically mimics proteolytic activation of human ENaC |
Praveen Anand, Arjun Puranik, Murali Aravamudan, AJ Venkatakrishnan, Venky Soundararajan |
122 |
[GO] |
eLife |
2020―May―11 |
Screening of healthcare workers for SARS-CoV-2 highlights the role of asymptomatic carriage in COVID-19 transmission |
Lucy Rivett, Sushmita Sridhar, Dominic Sparkes, Matthew Routledge, Nick K Jones, Sally Forrest, et al. (+20) Jamie Young, Joana Pereira-Dias, William L Hamilton, Mark Ferris, M Estee Torok, Luke Meredith, Martin D Curran, Stewart Fuller, Afzal Chaudhry, Ashley Shaw, Richard J Samworth, John R Bradley, Gordon Dougan, Kenneth G C Smith, Paul J Lehner, Nicholas J Matheson, Giles Wright, Ian G Goodfellow, Stephen Baker, Michael P Weekes |
123 |
[GO] |
eLife |
2020―Apr―27 |
Kallikrein-kinin blockade in patients with COVID-19 to prevent acute respiratory distress syndrome |
Frank L van de Veerdonk, Mihai G Netea, Marcel van Deuren, Jos WM van der Meer, Quirijn de Mast, Roger J Brüggemann, Hans van der Hoeven |
124 |
[GO] |
eLife |
2020―Apr―06 |
Potential harmful effects of discontinuing ACE-inhibitors and ARBs in COVID-19 patients |
Gian Paolo Rossi, Viola Sanga, Matthias Barton |
125 |
[GO] |
eLife |
2020―Mar―31 |
SARS-CoV-2 (COVID-19) by the numbers |
Yinon M Bar-On, Avi Flamholz, Rob Phillips, Ron Milo |
126 |
[GO] |
eLife |
2020―Mar―25 |
Publishing in the time of COVID-19 |
Michael B Eisen, Anna Akhmanova, Timothy E Behrens, Detlef Weigel |
127 |
[GO] |
eLife |
2020―Feb―24 |
Estimated effectiveness of symptom and risk screening to prevent the spread of COVID-19 |
Katelyn Gostic, Ana C R Gomez, Riley O Mummah, Adam J Kucharski, James O Lloyd-Smith |
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