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COVID answers in Scientific Journals all over the world

Elsevier: STAR Protocols
  original article Date Title Authors   All Authors
1 [GO] 2021―Dec―08 Detection of N6-methyladenosine in SARS-CoV-2 RNA by methylated RNA immunoprecipitation sequencing (MeRIP-Seq) Na Li, Tariq Rana
2 [GO] 2021―Dec―03 Global metabolome profiling of COVID-19 respiratory specimen using High Resolution Mass Spectrometry (HRMS) Nupur Sharma, Sadam H. Bhat, Gaurav Tripathi, Manisha Yadav, Babu Mathew, Vasundhra Bindal, et al. (+4)
3 [GO] 2021―Nov―27 Protocol for global proteome, virome, and metaproteome profiling of respiratory specimen (VTM) in COVID-19 patient by LC-MS/MS-based analysis Gaurav Tripathi, Nupur Sharma, Vasundhra Bindal, Manisha Yadav, Babu Mathew, Shvetank Sharma, et al. (+3)
4 [GO] 2021―Nov―22 Detection of SARS-CoV-2 spike protein binding to ACE2 in living cells by TR-FRET Erika Cecon, Julie Dam, Ralf Jockers
5 [GO] 2021―Oct―12 Infecting human hematopoietic stem and progenitor cells with SARS-CoV-2 Hector Huerga Encabo, Rachel Ulferts, Aneesh Sharma, Rupert Beale, Dominique Bonnet
6 [GO] 2021―Oct―12 Domain-specific biochemical and serological characterization of SARS-CoV-2 nucleocapsid protein Chao Wu, Abraham J. Qavi, Austin B. Moyle, Nicole D. Wagner, Asmaa Hachim, Niloufar Kavian, et al. (+10)
7 [GO] 2021―Sep―27 UnCovid: A versatile, low-cost, and open-source protocol for SARS-CoV-2 RNA detection Roberto Alcántara, Katherin Peñaranda, Gabriel Mendoza-Rojas, Jose A. Nakamoto, Eva Dueñas, Daniela Alvarez, et al. (+2)
8 [GO] 2021―Sep―24 Computational workflow for functional characterization of COVID-19 through secondary data analysis Sudhir Ghandikota, Mihika Sharma, Anil G. Jegga
9 [GO] 2021―Sep―22 Identification of SARS-CoV-2 S RBD escape mutants using yeast screening and deep mutational scanning Cyrus M. Haas, Irene M. Francino-Urdaniz, Paul J. Steiner, Timothy A. Whitehead
10 [GO] 2021―Sep―13 A new flow cytometry assay to measure antibody dependent cellular cytotoxicity against SARS-CoV-2 Spike expressing cells Guillaume Beaudoin-Bussières, Jonathan Richard, Jérémie Prévost, Guillaume Goyette, Andrés Finzi
11 [GO] 2021―Aug―27 A tissue culture infectious dose (TCID)-derived protocol for testing of SARS-CoV-2 neutralization of serum antibodies on adherent cells Fabio Hasler, Agathe Duda, Thomas M. Kündig, Pål Johansen
12 [GO] 2021―Aug―27 Application of pseudotyped virus particles to monitor Ebola virus and SARS-CoV-2 viral entry in human cell lines Madeleine Eichler, Ebru Aksi, Josef Pfeilschifter, Gergely Imre
13 [GO] 2021―Aug―26 An antigen microarray protocol for COVID-19 serological analysis Joseph Longworth, Gunnar Dittmar
14 [GO] 2021―Aug―17 Fluorogenic in vitro activity assay for the main protease Mpro from SARS-CoV-2 and its adaptation to the identification of inhibitors. Ihssen Julian, Faccio Greta, Yao Chunyan, Sirec Teja, Spitz Urs
15 [GO] 2021―Aug―14 Optimization of antigen specific CD8+ T cell activation conditions for infectious diseases including COVID-19 Chanchan Xiao, Congling Qiu, Jieping Deng, Jiezhou Ye, Lijuan Gao, Jun Su, et al. (+3)
16 [GO] 2021―Aug―13 Luciferase reporter assays to monitor interferon signaling modulation by SARS-CoV-2 proteins Maximilian Hirschenberger, Manuel Hayn, Alexandre Laliberté, Lennart Koepke, Frank Kirchhoff, Konstantin Maria Johannes Sparrer
17 [GO] 2021―Aug―02 An optimized, amplicon-based approach for sequencing of SARS-CoV-2 from patient samples using COVIDSeq assay on Illumina MiSeq sequencing platforms Rahul C. Bhoyar, Vigneshwar Senthivel, Bani Jolly, Mohamed Imran, Abhinav Jain, Mohit Kumar Divakar, et al. (+2)
18 [GO] 2021―Jul―10 SARS-CoV-2 Spike linear epitope scanning via a peptide microarray through sera profiling Yang Li, Dan-yun Lai, Sheng-ce Tao
19 [GO] 2021―Jun―19 A flow cytometry-based assay for serological detection of anti-spike antibodies in COVID-19 patients Yun Shan Goh, Lisa F.P. Ng, Laurent Renia
20 [GO] 2021―Jun―18 Immunohistochemistry for protein detection in PFA-fixed paraffin-embedded SARS-CoV-2 infected COPD airway epithelium. Jaspreet Kaur Osan, Beth Ann DeMontigny, Masfique Mehedi
21 [GO] 2021―Jun―09 Protein purification and crystallization of HLA-A*02:01 in complex with SARS-CoV-2 peptides Demetra S.M. Chatzileontiadou, Christopher Szeto, Dhilshan Jayasinghe, Stephanie Gras
22 [GO] 2021―May―29 Protocol for constructing large size human antibody heavy chain variable domain (VH) library and selection of SARS-CoV-2 neutralizing antibody domains Chuan Chen, Zehua Sun, Xianglei Liu, Wei Li, Dimiter S. Dimitrov
23 [GO] 2021―May―12 Sample processing and single cell RNA-sequencing of peripheral blood immune cells from COVID-19 patients Changfu Yao, Stephanie A. Bora, Peter Chen, Helen S. Goodridge, Sina A. Gharib
24 [GO] 2021―May―10 A qualitative IgG ELISA for detection of SARS-CoV-2 specific antibodies in Syrian hamster serum samples Anita Shete, Sreelekshmy Mohandas, Rajlaxmi Jain, Pragya D. Yadav
25 [GO] 2021―Feb―05 Ex vivo assay to evaluate the efficacy of drugs targeting sphingolipids in preventing SARS-CoV-2 infection of nasal epithelial cells Katrin Anne Becker, Alexander Carpinteiro, Markus Hoffmann, Stefan Pöhlmann, Johannes Kornhuber, Erich Gulbins
26 [GO] 2021―Feb―05 Expression and Purification of Tag-Free SARS-CoV-2 RNA-Dependent RNA Polymerase in Escherichia coli Tyler L. Dangerfield, Nathan Z. Huang, Kenneth A. Johnson
27 [GO] 2020―Dec―17 Optimized workflow for single-cell transcriptomics on infectious diseases including COVID-19 Elena De Domenico, Lorenzo Bonaguro, Jonas Schulte-Schrepping, Matthias Becker, Kristian Händler, Joachim L. Schultze
28 [GO] 2020―Dec―17 Glycomics-informed glycoproteomic analysis of site-specific glycosylation for SARS-CoV-2 spike protein Katelyn E. Rosenbalm, Michael Tiemeyer, Lance Wells, Kazuhiro Aoki, Peng Zhao
29 [GO] 2020―Nov―09 Sensitization of Non-permissive Laboratory Mice to SARS-CoV-2 with a Replication-Deficient Adenovirus Expressing Human ACE2 Lok-Yin Roy Wong, Kun Li, Jing Sun, Zhen Zhuang, Jincun Zhao, Paul B. McCray, Stanley Perlman
30 [GO] 2020―Sep―15 qRT-PCR Platforms for Diagnosing and Reporting SARS-CoV-2 Infection in Human Samples Richard M. Giadone, Aditya Mithal, Gregory J. Miller, Taylor M. Matte, Anthony K. Yeung, Todd W. Dowrey, et al. (+5)


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